ENSMUSG00000037475


Mus musculus

Features
Gene ID: ENSMUSG00000037475
  
Biological name :Thoc2
  
Synonyms : B1AZI6 / Thoc2 / THO complex subunit 2
  
Possible biological names infered from orthology : Q8NI27 / THO complex 2
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A4
Gene start: 41794991
Gene end: 41920674
  
Corresponding Affymetrix probe sets: 10604248 (MoGene1.0st)   1437634_at (Mouse Genome 430 2.0 Array)   1438736_at (Mouse Genome 430 2.0 Array)   1444004_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119460
Ensembl peptide - ENSMUSP00000121941
Ensembl peptide - ENSMUSP00000120342
Ensembl peptide - ENSMUSP00000119823
Ensembl peptide - ENSMUSP00000044677
Ensembl peptide - ENSMUSP00000114148
Ensembl peptide - ENSMUSP00000115815
Ensembl peptide - ENSMUSP00000118106
Ensembl peptide - ENSMUSP00000118960
NCBI entrez gene - 331401     See in Manteia.
MGI - MGI:2442413
RefSeq - NM_001033422
RefSeq - XM_006541503
RefSeq Peptide - NP_001028594
swissprot - F6RBN0
swissprot - F6SBF2
swissprot - B8A4C2
swissprot - F6W2C7
swissprot - Q8C690
swissprot - F6VK25
swissprot - B1AZI7
swissprot - B1AZI6
swissprot - F6QCT0
Ensembl - ENSMUSG00000037475
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thoc2ENSDARG00000037503Danio rerio
 THOC2ENSGALG00000008507Gallus gallus
 THOC2ENSG00000125676Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BC005561 / cDNA sequence BC005561ENSMUSG0000007906589


Protein motifs (from Interpro)
Interpro ID Name
 IPR021418  THO complex, subunitTHOC2, C-terminal
 IPR021726  THO complex, subunitTHOC2, N-terminal
 IPR032302  THO complex subunit 2, N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis IMP
 biological_processGO:0001824 blastocyst development IMP
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0010468 regulation of gene expression IMP
 biological_processGO:0010793 regulation of mRNA export from nucleus IMP
 biological_processGO:0010977 negative regulation of neuron projection development IEA
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IEA
 biological_processGO:0017145 stem cell division IMP
 biological_processGO:0046784 viral mRNA export from host cell nucleus IEA
 biological_processGO:0048666 neuron development IEA
 biological_processGO:0048699 generation of neurons IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0000346 transcription export complex IEA
 cellular_componentGO:0000347 THO complex IEA
 cellular_componentGO:0000445 THO complex part of transcription export complex IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IMP
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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