ENSMUSG00000040452


Mus musculus

Features
Gene ID: ENSMUSG00000040452
  
Biological name :Cdh12
  
Synonyms : Cadherin-12 / Cdh12 / Q5RJH3
  
Possible biological names infered from orthology : P55289
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: A2
Gene start: 20449265
Gene end: 21589533
  
Corresponding Affymetrix probe sets: 10423258 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000074632
Ensembl peptide - ENSMUSP00000153750
NCBI entrez gene - 215654     See in Manteia.
MGI - MGI:109503
RefSeq - XM_017316547
RefSeq - NM_001008420
RefSeq - XM_017316545
RefSeq - XM_017316546
RefSeq - XM_011245341
RefSeq - XM_011245342
RefSeq - XM_011245343
RefSeq - XM_011245344
RefSeq - XM_011245345
RefSeq - XM_011245347
RefSeq Peptide - NP_001008420
swissprot - Q5RJH3
Ensembl - ENSMUSG00000040452
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh12aENSDARG00000078226Danio rerio
 CDH12ENSGALG00000012941Gallus gallus
 CDH12ENSG00000154162Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cdh10 / P70408 / Cadherin-10 / Q9Y6N8*ENSMUSG0000002232160
Cdh6 / P97326 / Cadherin-6 / P55285*ENSMUSG0000003938560
Cdh7 / Q8BM92 / Cadherin-7 / Q9ULB5*ENSMUSG0000002631258
Cdh9 / cadherin 9 / Q9ULB4*ENSMUSG0000002537057
Cdh18 / cadherin 18 / Q13634*ENSMUSG0000004042057
Cdh11 / P55288 / Cadherin-11 / P55287*ENSMUSG0000003167355
Cdh8 / P97291 / Cadherin-8 / P55286*ENSMUSG0000003651055
Cdh20 / Q9Z0M3 / Cadherin-20 / Q9HBT6*ENSMUSG0000005084055
Cdh22 / Q9WTP5 / Cadherin-22 / Q9UJ99*ENSMUSG0000005316649
Cdh24 / Q6PFX6 / Cadherin-24 / Q86UP0*ENSMUSG0000005967447
Cdh19 / cadherin 19, type 2 / Q9H159* / cadherin 19*ENSMUSG0000004721643


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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