Manteia

ENSMUSG00000051900

Mus musculus

Features

Gene ID:	ENSMUSG00000051900

Biological name :	Abca16

Synonyms :	Abca16 / ATP-binding cassette, sub-family A (ABC1), member 16

Possible biological names infered from orthology :

Species:	Mus musculus

Chr. number:	7
Strand:	1
Band:	F2
Gene start:	120409647
Gene end:	120544813

Corresponding Affymetrix probe sets:	10556901 (MoGene1.0st) 1445033_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000061094 Ensembl peptide - ENSMUSP00000112736 NCBI entrez gene - 233810 See in Manteia. MGI - MGI:2388711 RefSeq - NM_001278944 RefSeq - NM_001278943 RefSeq - XM_006507683 RefSeq Peptide - NP_001265872 RefSeq Peptide - NP_001265873 swissprot - E9QAF2 swissprot - E9PWJ7 Ensembl - ENSMUSG00000051900

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
abca3b	ENSDARG00000100524	Danio rerio
ABCA3	ENSGALG00000037837	Gallus gallus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
Abca15 / ATP-binding cassette, sub-family A (ABC1), member 15	ENSMUSG00000054746	49
Abca14 / ATP-binding cassette, sub-family A (ABC1), member 14	ENSMUSG00000062017	47
Abca3 / Q8R420 / ATP-binding cassette, sub-family A (ABC1), member 3 / Q99758* / ATP binding cassette subfamily A member 3*	ENSMUSG00000024130	45
Abca17 / E9PX95 / ATP-binding cassette, sub-family A (ABC1), member 17	ENSMUSG00000035435	40
Abca1 / P41233 / ATP-binding cassette, sub-family A (ABC1), member 1 / O95477* / ATP binding cassette subfamily A member 1*	ENSMUSG00000015243	33
Abca2 / ATP-binding cassette, sub-family A (ABC1), member 2 / Q9BZC7* / ATP binding cassette subfamily A member 2*	ENSMUSG00000026944	31
Abca4 / O35600 / ATP-binding cassette, sub-family A (ABC1), member 4 / P78363* / ATP binding cassette subfamily A member 4*	ENSMUSG00000028125	31
Abca7 / Q91V24 / ATP-binding cassette, sub-family A (ABC1), member 7 / Q8IZY2* / ATP binding cassette subfamily A member 7*	ENSMUSG00000035722	31
Abca13 / Q5SSE9 / ATP-binding cassette, sub-family A (ABC1), member 13 / Q86UQ4* / ATP binding cassette subfamily A member 13*	ENSMUSG00000004668	28
Abca12 / ATP-binding cassette, sub-family A (ABC1), member 12 / Q86UK0* / ATP binding cassette subfamily A member 12*	ENSMUSG00000050296	28
Abca5 / Q8K448 / ATP-binding cassette, sub-family A (ABC1), member 5 / Q8WWZ7* / ATP binding cassette subfamily A member 5*	ENSMUSG00000018800	23
Q8K440 / Abca8b / ATP-binding cassette, sub-family A (ABC1), member 8b / ABCA8* / O94911* / ATP binding cassette subfamily A member 8*	ENSMUSG00000020620	23
Abca9 / Q8K449 / ATP-binding cassette, sub-family A (ABC1), member 9 / Q8IUA7* / ATP binding cassette subfamily A member 9*	ENSMUSG00000041797	22
Abca8a / Q8K442 / ATP-binding cassette, sub-family A (ABC1), member 8a	ENSMUSG00000041828	22
Abca6 / Q8K441 / ATP-binding cassette, sub-family A (ABC1), member 6 / Q8N139* / ATP binding cassette subfamily A member 6*	ENSMUSG00000044749	21

Protein motifs (from Interpro)

Interpro ID	Name
IPR003439	ABC transporter-like
IPR003593	AAA+ ATPase domain
IPR026082	ABC transporter A
IPR027417	P-loop containing nucleoside triphosphate hydrolase

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0006869	lipid transport	IBA
biological_process	GO:0055085	transmembrane transport	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
cellular_component	GO:0043231	intracellular membrane-bounded organelle	IBA
molecular_function	GO:0000166	nucleotide binding	IEA
molecular_function	GO:0005524	ATP binding	IEA
molecular_function	GO:0016887	ATPase activity	IEA
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2025 contact: otassy@igbmc.fr