ENSGALG00000037837


Gallus gallus

Features
Gene ID: ENSGALG00000037837
  
Biological name :ABCA3
  
Synonyms : ABCA3 / ATP binding cassette subfamily A member 3
  
Possible biological names infered from orthology : Abca14 / Abca15 / Abca16 / Abca17 / ATP-binding cassette, sub-family A (ABC1), member 14 / ATP-binding cassette, sub-family A (ABC1), member 15 / ATP-binding cassette, sub-family A (ABC1), member 16 / ATP-binding cassette, sub-family A (ABC1), member 17 / ATP-binding cassette, sub-family A (ABC1), member 3 / E9PX95 / Q8R420 / Q99758
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 13626875
Gene end: 13651279
  
Corresponding Affymetrix probe sets: Gga.7294.1.S1_at (Chicken Array)   Gga.7294.2.S1_at (Chicken Array)   GgaAffx.25344.1.S1_s_at (Chicken Array)   GgaAffx.25344.3.S1_s_at (Chicken Array)   GgaAffx.25344.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046137
NCBI entrez gene - 416386     See in Manteia.
RefSeq - XM_004945434
RefSeq - XM_414701
swissprot - A0A1D5P0F9
Ensembl - ENSGALG00000037837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abca3bENSDARG00000100524Danio rerio
 ABCA3ENSG00000167972Homo sapiens
 Abca14ENSMUSG00000062017Mus musculus
 Abca15ENSMUSG00000054746Mus musculus
 Abca16ENSMUSG00000051900Mus musculus
 Abca17ENSMUSG00000035435Mus musculus
 Abca3ENSMUSG00000024130Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCA1 / ATP-binding cassette sub-family A member 1 / O95477* / P41233* / ATP binding cassette subfamily A member 1* / ATP-binding cassette, sub-family A (ABC1), member 1*ENSGALG0000001543337
ABCA7 / ATP binding cassette subfamily A member 7 / Q8IZY2* / Q91V24* / ATP-binding cassette, sub-family A (ABC1), member 7*ENSGALG0000000245336
ABCA2 / ATP binding cassette subfamily A member 2 / Q9BZC7* / ATP-binding cassette, sub-family A (ABC1), member 2*ENSGALG0000003689436
ABCA4 / ATP binding cassette subfamily A member 4 / O35600* / P78363* / ATP-binding cassette, sub-family A (ABC1), member 4*ENSGALG0000000575235
ABCA12 / ATP binding cassette subfamily A member 12 / Q86UK0* / ATP-binding cassette, sub-family A (ABC1), member 12*ENSGALG0000000355330
ABCA5 / ATP binding cassette subfamily A member 5 / Q8K448* / Q8WWZ7* / ATP-binding cassette, sub-family A (ABC1), member 5*ENSGALG0000000433324
ABCA8* / ABCA9* / ABCA6* / ABCA10* / Abca8a* / Abca8b* / O94911* / Q8IUA7* / Q8K440* / Q8K441* / Q8K442* / Q8K449* / Q8N139* / Q8WWZ4* / ATP binding cassette subfamily A member 6* / ATP bin...ENSGALG0000002139924
ABCA8* / ABCA9* / ABCA6* / ABCA10* / Abca8a* / Abca8b* / O94911* / Q8IUA7* / Q8K440* / Q8K441* / Q8K442* / Q8K449* / Q8N139* / Q8WWZ4* / ATP binding cassette subfamily A member 6* / ATP bin...ENSGALG0000002139523
ABCA13* / Q5SSE9* / Q86UQ4* / ATP binding cassette subfamily A member 13* / ATP-binding cassette, sub-family A (ABC1), member 13*ENSGALG0000001307915


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR017871  ABC transporter, conserved site
 IPR026082  ABC transporter A
 IPR026969  ATP-binding cassette sub-family A member 3
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0097208 alveolar lamellar body IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis
Surfactant metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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