ENSGALG00000036894


Gallus gallus

Features
Gene ID: ENSGALG00000036894
  
Biological name :ABCA2
  
Synonyms : ABCA2 / ATP binding cassette subfamily A member 2
  
Possible biological names infered from orthology : ATP-binding cassette, sub-family A (ABC1), member 2 / Q9BZC7
  
Species: Gallus gallus
  
Chr. number: 17
Strand: -1
Band:
Gene start: 910977
Gene end: 933990
  
Corresponding Affymetrix probe sets: Gga.10970.1.S1_at (Chicken Array)   GgaAffx.812.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047682
Ensembl peptide - ENSGALP00000050235
NCBI entrez gene - 426955     See in Manteia.
RefSeq - XM_015279612
RefSeq - XM_015279610
RefSeq - XM_015279611
RefSeq - XM_015279607
RefSeq - XM_015279609
swissprot - A0A1D5PBV3
swissprot - A0A1D5P4S0
Ensembl - ENSGALG00000036894
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abca2ENSDARG00000013500Danio rerio
 ABCA2ENSG00000107331Homo sapiens
 Abca2ENSMUSG00000026944Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCA1 / ATP-binding cassette sub-family A member 1 / O95477* / P41233* / ATP binding cassette subfamily A member 1* / ATP-binding cassette, sub-family A (ABC1), member 1*ENSGALG0000001543338
ABCA4 / ATP binding cassette subfamily A member 4 / O35600* / P78363* / ATP-binding cassette, sub-family A (ABC1), member 4*ENSGALG0000000575235
ABCA7 / ATP binding cassette subfamily A member 7 / Q8IZY2* / Q91V24* / ATP-binding cassette, sub-family A (ABC1), member 7*ENSGALG0000000245334
ABCA12 / ATP binding cassette subfamily A member 12 / Q86UK0* / ATP-binding cassette, sub-family A (ABC1), member 12*ENSGALG0000000355328
ABCA3 / ATP binding cassette subfamily A member 3 / Abca17* / Abca14* / Abca15* / Abca16* / E9PX95* / Q8R420* / Q99758* / ATP-binding cassette, sub-family A (ABC1), member 3* / ATP-binding ...ENSGALG0000003783725
ABCA5 / ATP binding cassette subfamily A member 5 / Q8K448* / Q8WWZ7* / ATP-binding cassette, sub-family A (ABC1), member 5*ENSGALG0000000433316
ABCA8* / ABCA9* / ABCA6* / ABCA10* / Abca8a* / Abca8b* / O94911* / Q8IUA7* / Q8K440* / Q8K441* / Q8K442* / Q8K449* / Q8N139* / Q8WWZ4* / ATP binding cassette subfamily A member 6* / ATP bin...ENSGALG0000002139916
ABCA8* / ABCA9* / ABCA6* / ABCA10* / Abca8a* / Abca8b* / O94911* / Q8IUA7* / Q8K440* / Q8K441* / Q8K442* / Q8K449* / Q8N139* / Q8WWZ4* / ATP binding cassette subfamily A member 6* / ATP bin...ENSGALG0000002139515
ABCA13* / Q5SSE9* / Q86UQ4* / ATP binding cassette subfamily A member 13* / ATP-binding cassette, sub-family A (ABC1), member 13*ENSGALG0000001307913


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR017871  ABC transporter, conserved site
 IPR026082  ABC transporter A
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0032383 regulation of intracellular cholesterol transport IEA
 biological_processGO:0042632 cholesterol homeostasis IEA
 biological_processGO:0048545 response to steroid hormone IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0070723 response to cholesterol IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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