ENSDARG00000013500


Danio rerio

Features
Gene ID: ENSDARG00000013500
  
Biological name :abca2
  
Synonyms : abca2 / ATP-binding cassette, sub-family A (ABC1), member 2
  
Possible biological names infered from orthology : ATP binding cassette subfamily A member 2 / Q9BZC7
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 25088622
Gene end: 25236340
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114904
Ensembl peptide - ENSDARP00000136081
Ensembl peptide - ENSDARP00000144943
swissprot - A2BI69
swissprot - A7E279
ZFIN ID - ZDB-GENE-050517-1
Ensembl - ENSDARG00000013500
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCA2ENSGALG00000036894Gallus gallus
 ABCA2ENSG00000107331Homo sapiens
 Abca2ENSMUSG00000026944Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abca1a / ATP-binding cassette, sub-family A (ABC1), member 1A / ABCA1* / P41233* / O95477* / ATP binding cassette subfamily A member 1* / ATP-binding cassette, sub-family A (ABC1), member 1*ENSDARG0000007463537
abca4b / ATP-binding cassette, sub-family A (ABC1), member 4b / ABCA4* / P78363* / O35600* / ATP binding cassette subfamily A member 4* / ATP-binding cassette, sub-family A (ABC1), member 4*ENSDARG0000006266136
abca4a / ATP-binding cassette, sub-family A (ABC1), member 4a / ABCA4* / P78363* / O35600* / ATP binding cassette subfamily A member 4* / ATP-binding cassette, sub-family A (ABC1), member 4*ENSDARG0000005716935
abca12 / ATP-binding cassette, sub-family A (ABC1), member 12 / Q86UK0* / ATP binding cassette subfamily A member 12*ENSDARG0000007474926
abca3b / ATP-binding cassette, sub-family A (ABC1), member 3b / ABCA3* / Abca14* / Abca15* / Abca16* / Abca17* / E9PX95* / Q8R420* / Q99758* / ATP binding cassette subfamily A member 3* / A...ENSDARG0000010052426
abca5 / ATP-binding cassette, sub-family A (ABC1), member 5 / Q8K448* / Q8WWZ7* / ATP binding cassette subfamily A member 5*ENSDARG0000007404117
zgc:172302 / ABCA7* / Q8IZY2* / ATP binding cassette subfamily A member 7*ENSDARG0000007422117


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR017871  ABC transporter, conserved site
 IPR026082  ABC transporter A
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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