ENSDARG00000074041


Danio rerio

Features
Gene ID: ENSDARG00000074041
  
Biological name :abca5
  
Synonyms : abca5 / ATP-binding cassette, sub-family A (ABC1), member 5
  
Possible biological names infered from orthology : ATP binding cassette subfamily A member 5 / Q8K448 / Q8WWZ7
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 38807604
Gene end: 38856048
  
Corresponding Affymetrix probe sets: Dr.7652.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000128698
NCBI entrez gene - 100151075     See in Manteia.
RefSeq - XM_005156401
swissprot - F1QEL5
ZFIN ID - ZDB-GENE-050517-5
Ensembl - ENSDARG00000074041
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCA5ENSGALG00000004333Gallus gallus
 ABCA5ENSG00000154265Homo sapiens
 Abca5ENSMUSG00000018800Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
abca1a / ATP-binding cassette, sub-family A (ABC1), member 1A / ABCA1* / P41233* / O95477* / ATP binding cassette subfamily A member 1* / ATP-binding cassette, sub-family A (ABC1), member 1*ENSDARG0000007463527
abca4b / ATP-binding cassette, sub-family A (ABC1), member 4b / ABCA4* / P78363* / O35600* / ATP binding cassette subfamily A member 4* / ATP-binding cassette, sub-family A (ABC1), member 4*ENSDARG0000006266126
abca3b / ATP-binding cassette, sub-family A (ABC1), member 3b / ABCA3* / Abca14* / Abca15* / Abca16* / Abca17* / E9PX95* / Q8R420* / Q99758* / ATP binding cassette subfamily A member 3* / A...ENSDARG0000010052426
abca2 / ATP-binding cassette, sub-family A (ABC1), member 2 / Q9BZC7* / ATP binding cassette subfamily A member 2*ENSDARG0000001350025
abca4a / ATP-binding cassette, sub-family A (ABC1), member 4a / ABCA4* / P78363* / O35600* / ATP binding cassette subfamily A member 4* / ATP-binding cassette, sub-family A (ABC1), member 4*ENSDARG0000005716925
abca12 / ATP-binding cassette, sub-family A (ABC1), member 12 / Q86UK0* / ATP binding cassette subfamily A member 12*ENSDARG0000007474924
zgc:172302 / ABCA7* / Q8IZY2* / ATP binding cassette subfamily A member 7*ENSDARG0000007422113


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IBA
 biological_processGO:0030301 cholesterol transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IBA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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