ENSGALG00000021399


Gallus gallus

Features
Gene ID: ENSGALG00000021399
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : ABCA10 / ABCA6 / ABCA8 / Abca8a / Abca8b / ABCA9 / ATP-binding cassette, sub-family A (ABC1), member 6 / ATP-binding cassette, sub-family A (ABC1), member 8a / ATP-binding cassette, sub-family A (ABC1), member 8b / ATP-binding cassette, sub-family A (ABC1), member 9 / ATP binding cassette subfamily A member 10 / ATP binding cassette subfamily A member 6 / ATP binding cassette subfamily A member 8 / ATP binding cassette subfamily A member 9 / O94911 / Q8IUA7 / Q8K440 / Q8K441 / Q8K442 / Q8K449 / Q8N139 / Q8WWZ4
  
Species: Gallus gallus
  
Chr. number: 18
Strand: -1
Band:
Gene start: 7977127
Gene end: 7997446
  
Corresponding Affymetrix probe sets: GgaAffx.2698.1.S1_s_at (Chicken Array)   GgaAffx.2698.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006898
NCBI entrez gene - 417440     See in Manteia.
RefSeq - XM_004946232
RefSeq - XM_015279944
swissprot - F1NW73
Ensembl - ENSGALG00000021399
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ABCA10ENSG00000154263Homo sapiens
 ABCA6ENSG00000154262Homo sapiens
 ABCA8ENSG00000141338Homo sapiens
 ABCA9ENSG00000154258Homo sapiens
 Abca6ENSMUSG00000044749Mus musculus
 Abca8aENSMUSG00000041828Mus musculus
 Abca8bENSMUSG00000020620Mus musculus
 Abca9ENSMUSG00000041797Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCA8* / ABCA9* / ABCA6* / ABCA10* / Abca8a* / Abca8b* / O94911* / Q8IUA7* / Q8K440* / Q8K441* / Q8K442* / Q8K449* / Q8N139* / Q8WWZ4* / ATP binding cassette subfamily A member 6* / ATP bin...ENSGALG0000002139551
ABCA5 / ATP binding cassette subfamily A member 5 / Q8K448* / Q8WWZ7* / ATP-binding cassette, sub-family A (ABC1), member 5*ENSGALG0000000433343
ABCA1 / ATP-binding cassette sub-family A member 1 / O95477* / P41233* / ATP binding cassette subfamily A member 1* / ATP-binding cassette, sub-family A (ABC1), member 1*ENSGALG0000001543326
ABCA7 / ATP binding cassette subfamily A member 7 / Q8IZY2* / Q91V24* / ATP-binding cassette, sub-family A (ABC1), member 7*ENSGALG0000000245325
ABCA4 / ATP binding cassette subfamily A member 4 / O35600* / P78363* / ATP-binding cassette, sub-family A (ABC1), member 4*ENSGALG0000000575225
ABCA3 / ATP binding cassette subfamily A member 3 / Abca17* / Abca14* / Abca15* / Abca16* / E9PX95* / Q8R420* / Q99758* / ATP-binding cassette, sub-family A (ABC1), member 3* / ATP-binding ...ENSGALG0000003783725
ABCA12 / ATP binding cassette subfamily A member 12 / Q86UK0* / ATP-binding cassette, sub-family A (ABC1), member 12*ENSGALG0000000355324
ABCA2 / ATP binding cassette subfamily A member 2 / Q9BZC7* / ATP-binding cassette, sub-family A (ABC1), member 2*ENSGALG0000003689424
ABCA13* / Q5SSE9* / Q86UQ4* / ATP binding cassette subfamily A member 13* / ATP-binding cassette, sub-family A (ABC1), member 13*ENSGALG0000001307911


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR017871  ABC transporter, conserved site
 IPR026082  ABC transporter A
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IBA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis
ABC-family proteins mediated transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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