ENSMUSG00000053338


Mus musculus

Features
Gene ID: ENSMUSG00000053338
  
Biological name :Tarm1
  
Synonyms : B6A8R8 / Tarm1 / T-cell-interacting, activating receptor on myeloid cells protein 1
  
Possible biological names infered from orthology : B6A8C7 / T cell-interacting, activating receptor on myeloid cells 1
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: A1
Gene start: 3486500
Gene end: 3502624
  
Corresponding Affymetrix probe sets: 10598093 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000069745
Ensembl peptide - ENSMUSP00000145491
Ensembl peptide - ENSMUSP00000145188
NCBI entrez gene - 245126     See in Manteia.
MGI - MGI:2442280
RefSeq - XM_006539983
RefSeq - NM_177363
RefSeq - XM_006539979
RefSeq - XM_006539980
RefSeq Peptide - NP_796337
swissprot - A0A0N4SVP3
swissprot - A0A0R3P9C5
swissprot - B6A8R8
Ensembl - ENSMUSG00000053338
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IGSF1L3ENSGALG00000030005Gallus gallus
 TARM1ENSG00000248385Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Oscar / Q8VBT3 / Osteoclast-associated immunoglobulin-like receptor / Q8IYS5*ENSMUSG0000005459429
Igsf1 / Q7TQA1 / Immunoglobulin superfamily member 1 / Q8N6C5*ENSMUSG0000003111123
A1bg / Q19LI2 / alpha-1-B glycoprotein / P04217*ENSMUSG0000002234721


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002250 adaptive immune response IEA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:1900017 positive regulation of cytokine production involved in inflammatory response IDA
 biological_processGO:2000515 negative regulation of CD4-positive, alpha-beta T cell activation ISO
 biological_processGO:2000562 negative regulation of CD4-positive, alpha-beta T cell proliferation IDA
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0034987 immunoglobulin receptor binding ISO


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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