ENSMUSG00000067578


Mus musculus

Features
Gene ID: ENSMUSG00000067578
  
Biological name :Cbln4
  
Synonyms : Cbln4 / Cerebellin-4 / Q8BME9
  
Possible biological names infered from orthology : cerebellin 4 precursor / Q9NTU7
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: H3
Gene start: 172036233
Gene end: 172043466
  
Corresponding Affymetrix probe sets: 10490097 (MoGene1.0st)   1433607_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000085263
NCBI entrez gene - 228942     See in Manteia.
MGI - MGI:2154433
RefSeq - NM_175631
RefSeq Peptide - NP_783439
swissprot - Q8BME9
Ensembl - ENSMUSG00000067578
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cbln4ENSDARG00000061240Danio rerio
 CBLN4ENSGALG00000030821Gallus gallus
 CBLN4ENSG00000054803Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cbln2 / Q8BGU2 / Cerebellin-2 / Q8IUK8* / cerebellin 2 precursor*ENSMUSG0000002464771
Cbln1 / Q9R171 / Cerebellin-1 Cerebellin [des-Ser1]-cerebellin / P23435* / cerebellin 1 precursor*ENSMUSG0000003165467
Cbln3 / Q9JHG0 / Cerebellin-3 / Q6UW01* / cerebellin 3 precursor*ENSMUSG0000004038055
Q05A80 / Caprin2 / Q6IMN6* / caprin family member 2*ENSMUSG0000003030930
Q9ES30 / C1qtnf3 / Complement C1q tumor necrosis factor-related protein 3 / Q9BXJ4* / C1QTNF3-AMACR* / C1q and TNF related 3* / C1QTNF3-AMACR readthrough (NMD candidate)*ENSMUSG0000005891430
C1ql4 / Q4ZJM9 / Complement C1q-like protein 4 / Q86Z23* / complement C1q like 4*ENSMUSG0000000107626
C1ql2 / Q8CFR0 / Complement C1q-like protein 2 / Q7Z5L3* / complement C1q like 2*ENSMUSG0000003690726
C1ql3 / Q9ESN4 / Complement C1q-like protein 3 / Q5VWW1* / complement C1q like 3*ENSMUSG0000004963026
C1ql1 / O88992 / C1q-related factor / O75973* / complement C1q like 1*ENSMUSG0000004553224
Q60865 / Caprin1 / Q14444* / cell cycle associated protein 1*ENSMUSG000000271849


Protein motifs (from Interpro)
Interpro ID Name
 IPR001073  C1q domain
 IPR008983  Tumour necrosis factor-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009306 protein secretion IDA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Lama1tm1.1Arhi/Lama1tm1.2Arhi,Edil3Tg(Sox2-cre)1Amc/?
Genetic Background: involves: 129S1/Sv * 129X1/SvJ * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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