ENSMUSG00000079031


Mus musculus
translationinitiationBB287469factoreif-rna-bindingdomainstypenucleicacid-bindingob-foldconservedsitetranslationalbiologicalprocesscellularcomponentmolecularfunctionrnabindingactivity

Features
Gene ID: ENSMUSG00000079031
  
Biological name :BB287469
  
Synonyms : BB287469 / expressed sequence BB287469
  
Possible biological names infered from orthology : EIF1AX / eukaryotic translation initiation factor 1A, X-linked / P47813
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: D2
Gene start: 87816577
Gene end: 87820676
  
Corresponding Affymetrix probe sets: 10397541 (MoGene1.0st)   10397543 (MoGene1.0st)   10397551 (MoGene1.0st)   10401822 (MoGene1.0st)   10401829 (MoGene1.0st)   1427479_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000105776
NCBI entrez gene - 544881     See in Manteia.
MGI - MGI:3034635
RefSeq - NM_001177573
RefSeq Peptide - NP_001171044
swissprot - Q3UT53
Ensembl - ENSMUSG00000079031
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 eif1axaENSDARG00000029003Danio rerio
 eif1axbENSDARG00000057912Danio rerio
 EIF1AYENSGALG00000016410Gallus gallus
 EIF1AXENSG00000173674Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm4027 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG00000092019100
Gm5662 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000007902997
Gm2075 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009604997
Gm2022 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000011397197
Gm2016 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000007290596
Gm6803 / predicted 6803 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009680396
Gm8300 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000007903494
Gm5039 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009384794
Gm2056 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009571794
Gm8332 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009579994
Gm2035 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009661994
Gm5788 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000011380593
Eif1a / Q60872 / Eukaryotic translation initiation factor 1A / P47813* / EIF1AX* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000005756192
Gm21319 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009572492
Gm21936 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000011320192
Gm16368 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000011407592
Eif1ax / Q8BMJ3 / Eukaryotic translation initiation factor 1A, X-chromosomal / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000006719490


Protein motifs (from Interpro)
Interpro ID Name
 IPR001253  Translation initiation factor 1A (eIF-1A)
 IPR006196  RNA-binding domain, S1, IF1 type
 IPR012340  Nucleic acid-binding, OB-fold
 IPR018104  Translation initiation factor 1A (eIF-1A), conserved site


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic nitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic process
organic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound binding
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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