ENSMUSG00000095724


Mus musculus
translationinitiationGm21319factoreif-scomplexrna-bindingdomaintypenucleicacid-bindingob-foldconservedsitetranslationalrnabindingactivityformationternarysubsequentlyribosomalscanningstartcodonrecognition

Features
Gene ID: ENSMUSG00000095724
  
Biological name :Gm21319
  
Synonyms : Gm21319
  
Possible biological names infered from orthology : EIF1AX / eukaryotic translation initiation factor 1A, X-linked / P47813
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: D2
Gene start: 87772425
Gene end: 87775755
  
Corresponding Affymetrix probe sets: 10397541 (MoGene1.0st)   10397543 (MoGene1.0st)   10401829 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000126351
NCBI entrez gene - 100861908     See in Manteia.
MGI - MGI:5434674
RefSeq - NM_001270722
RefSeq Peptide - NP_001257651
swissprot - F6YNI8
Ensembl - ENSMUSG00000095724
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 eif1axaENSDARG00000029003Danio rerio
 eif1axbENSDARG00000057912Danio rerio
 EIF1AYENSGALG00000016410Gallus gallus
 EIF1AXENSG00000173674Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm5039 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009384795
Gm8300 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000007903494
Gm2056 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009571794
Gm8332 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009579994
Gm2035 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009661994
Gm5788 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000011380594
Gm2022 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000011397194
Eif1a / Q60872 / Eukaryotic translation initiation factor 1A / P47813* / EIF1AX* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000005756193
Eif1ax / Q8BMJ3 / Eukaryotic translation initiation factor 1A, X-chromosomal / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000006719493
Gm2016 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000007290593
Gm5662 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000007902993
Gm16368 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000011407593
BB287469 / expressed sequence BB287469 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000007903192
Gm4027 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009201992
Gm6803 / predicted 6803 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009680392
Gm21936 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000011320192
Gm2075 / EIF1AX* / P47813* / eukaryotic translation initiation factor 1A, X-linked*ENSMUSG0000009604991


Protein motifs (from Interpro)
Interpro ID Name
 IPR001253  Translation initiation factor 1A (eIF-1A)
 IPR006196  RNA-binding domain, S1, IF1 type
 IPR012340  Nucleic acid-binding, OB-fold
 IPR018104  Translation initiation factor 1A (eIF-1A), conserved site


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processnitrogen compound metabolic nitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic processcellular metabolic processprimary metabolic processprimary metabolic processorganic substance metabolic organic substance metabolic process
organic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound binding
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA


Pathways (from Reactome)
Pathway description
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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