ENSDARG00000000837


Danio rerio

Features
Gene ID: ENSDARG00000000837
  
Biological name :snx9a
  
Synonyms : snx9a / sorting nexin 9a
  
Possible biological names infered from orthology : Q91VH2 / Q9Y5X1 / SNX9 / sorting nexin 9
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 33158294
Gene end: 33201840
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000095249
NCBI entrez gene - 368424     See in Manteia.
RefSeq - NM_001012313
RefSeq Peptide - NP_001012313
swissprot - Q7ZZB1
ZFIN ID - ZDB-GENE-030616-66
Ensembl - ENSDARG00000000837
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX9ENSGALG00000013710Gallus gallus
 SNX9ENSG00000130340Homo sapiens
 Snx9ENSMUSG00000002365Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx9b / sorting nexin 9b / SNX9* / Q9Y5X1* / Q91VH2* / sorting nexin 9*ENSDARG0000006930267
snx18b / sorting nexin 18b / SNX18* / Q96RF0* / sorting nexin 18*ENSDARG0000004424635
snx18a / sorting nexin 18a / SNX18* / Q96RF0* / sorting nexin 18*ENSDARG0000006771334
snx33 / sorting nexin 33 / Q4VAA7* / Q8WV41*ENSDARG0000001495433


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001683  Phox homologous domain
 IPR014536  Sorting nexin 9 family
 IPR019497  Sorting nexin protein, WASP-binding domain
 IPR028644  Sorting nexin-9


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0000281 mitotic cytokinesis IEA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IBA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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