ENSG00000130340


Homo sapiens

Features
Gene ID: ENSG00000130340
  
Biological name :SNX9
  
Synonyms : Q9Y5X1 / SNX9 / sorting nexin 9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q25.3
Gene start: 157700387
Gene end: 157945077
  
Corresponding Affymetrix probe sets: 223027_at (Human Genome U133 Plus 2.0 Array)   223028_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000376024
Ensembl peptide - ENSP00000482920
Ensembl peptide - ENSP00000479382
NCBI entrez gene - 51429     See in Manteia.
OMIM - 605952
RefSeq - XM_005267015
RefSeq - XM_011535886
RefSeq - NM_016224
RefSeq Peptide - NP_057308
swissprot - Q9Y5X1
swissprot - A0A087WZW2
swissprot - A0A087WVE4
Ensembl - ENSG00000130340
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx9aENSDARG00000000837Danio rerio
 snx9bENSDARG00000069302Danio rerio
 SNX9ENSGALG00000013710Gallus gallus
 Snx9ENSMUSG00000002365Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX33 / Q8WV41 / sorting nexin 33ENSG0000017354832
SNX18 / Q96RF0 / sorting nexin 18ENSG0000017899631


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001683  Phox homologous domain
 IPR014536  Sorting nexin 9 family
 IPR019497  Sorting nexin protein, WASP-binding domain
 IPR027267  AH/BAR domain superfamily
 IPR028644  Sorting nexin-9
 IPR035558  SNX9, SH3 domain
 IPR036028  SH3-like domain superfamily
 IPR036871  PX domain superfamily
 IPR037425  Sorting nexin-9, BAR domain
 IPR037426  Sorting nexin-9, PX domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0000281 mitotic cytokinesis IMP
 biological_processGO:0006886 intracellular protein transport IMP
 biological_processGO:0006897 endocytosis IMP
 biological_processGO:0006898 receptor-mediated endocytosis IMP
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016197 endosomal transport IMP
 biological_processGO:0032461 positive regulation of protein oligomerization IDA
 biological_processGO:0036089 cleavage furrow formation IMP
 biological_processGO:0043547 positive regulation of GTPase activity IDA
 biological_processGO:0045860 positive regulation of protein kinase activity IDA
 biological_processGO:0051044 positive regulation of membrane protein ectodomain proteolysis IDA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0060988 lipid tube assembly IDA
 biological_processGO:0061024 membrane organization TAS
 biological_processGO:0097320 plasma membrane tubulation IDA
 cellular_componentGO:0001726 ruffle IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005802 trans-Golgi network IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030136 clathrin-coated vesicle IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031234 extrinsic component of cytoplasmic side of plasma membrane IDA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005545 1-phosphatidylinositol binding IDA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0035091 phosphatidylinositol binding IDA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IPI
 molecular_functionGO:0045296 cadherin binding IDA
 molecular_functionGO:0071933 Arp2/3 complex binding IDA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr