ENSGALG00000013710


Gallus gallus

Features
Gene ID: ENSGALG00000013710
  
Biological name :SNX9
  
Synonyms : SNX9 / sorting nexin 9
  
Possible biological names infered from orthology : Q91VH2 / Q9Y5X1
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 51880188
Gene end: 51917321
  
Corresponding Affymetrix probe sets: GgaAffx.8732.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022252
NCBI entrez gene - 421654     See in Manteia.
RefSeq - XM_015284222
RefSeq - XM_015284223
RefSeq - XM_015284224
RefSeq - XM_015284225
RefSeq - XM_015284226
RefSeq - XM_004935662
swissprot - E1BTY4
Ensembl - ENSGALG00000013710
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx9aENSDARG00000000837Danio rerio
 snx9bENSDARG00000069302Danio rerio
 SNX9ENSG00000130340Homo sapiens
 Snx9ENSMUSG00000002365Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX33 / sorting nexin 33 / Q4VAA7* / Q8WV41*ENSGALG0000003311031
SNX18 / sorting nexin 18 / Q96RF0*ENSGALG0000001491431


Protein motifs (from Interpro)
Interpro ID Name
 IPR001452  SH3 domain
 IPR001683  Phox homologous domain
 IPR014536  Sorting nexin 9 family
 IPR019497  Sorting nexin protein, WASP-binding domain
 IPR028644  Sorting nexin-9


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IEA
 biological_processGO:0000281 mitotic cytokinesis IEA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016197 endosomal transport IEA
 biological_processGO:0032461 positive regulation of protein oligomerization IEA
 biological_processGO:0036089 cleavage furrow formation IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0045860 positive regulation of protein kinase activity IEA
 biological_processGO:0051044 positive regulation of membrane protein ectodomain proteolysis IEA
 biological_processGO:0060988 lipid tube assembly IEA
 biological_processGO:0097320 plasma membrane tubulation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005802 trans-Golgi network IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030136 clathrin-coated vesicle IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031234 extrinsic component of cytoplasmic side of plasma membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IBA
 molecular_functionGO:0005545 1-phosphatidylinositol binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0045296 cadherin binding IEA
 molecular_functionGO:0071933 Arp2/3 complex binding IEA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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