ENSDARG00000001244


Danio rerio

Features
Gene ID: ENSDARG00000001244
  
Biological name :srrm1
  
Synonyms : serine/arginine repetitive matrix 1 / srrm1
  
Possible biological names infered from orthology : Q8IYB3 / serine and arginine repetitive matrix 1
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 25426091
Gene end: 25440344
  
Corresponding Affymetrix probe sets: Dr.26321.1.S1_at (Zebrafish Array)   Dr.8781.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124762
Ensembl peptide - ENSDARP00000124824
Ensembl peptide - ENSDARP00000111346
Ensembl peptide - ENSDARP00000123976
Ensembl peptide - ENSDARP00000124575
NCBI entrez gene - 406751     See in Manteia.
RefSeq - XM_005158502
swissprot - F8W280
swissprot - F8W2E1
swissprot - E7F1X7
swissprot - F8W467
swissprot - F8W2X4
ZFIN ID - ZDB-GENE-040426-2789
Ensembl - ENSDARG00000001244
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRRM1ENSGALG00000001283Gallus gallus
 SRRM1ENSG00000133226Homo sapiens
 Srrm1ENSMUSG00000028809Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002483  PWI domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr