ENSGALG00000001283


Gallus gallus

Features
Gene ID: ENSGALG00000001283
  
Biological name :SRRM1
  
Synonyms : serine/arginine repetitive matrix protein 1 / SRRM1
  
Possible biological names infered from orthology : Q8IYB3 / serine and arginine repetitive matrix 1
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 2533128
Gene end: 2549839
  
Corresponding Affymetrix probe sets: Gga.4399.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001957
Ensembl peptide - ENSGALP00000055309
Ensembl peptide - ENSGALP00000053894
NCBI entrez gene - 428216     See in Manteia.
RefSeq - XM_015297694
RefSeq - XM_015297690
RefSeq - XM_015297691
RefSeq - XM_015297692
RefSeq - XM_015297693
RefSeq - NM_001031494
RefSeq - XM_015297687
RefSeq - XM_015297688
RefSeq - XM_015297689
RefSeq Peptide - NP_001026665
swissprot - E1BQL2
swissprot - A0A1D5PQY8
swissprot - A0A1D5PM21
Ensembl - ENSGALG00000001283
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srrm1ENSDARG00000001244Danio rerio
 SRRM1ENSG00000133226Homo sapiens
 Srrm1ENSMUSG00000028809Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002483  PWI domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr