ENSDARG00000001729


Danio rerio

Features
Gene ID: ENSDARG00000001729
  
Biological name :strn3
  
Synonyms : striatin, calmodulin binding protein 3 / strn3
  
Possible biological names infered from orthology : Q13033 / Q9ERG2 / striatin 3
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 28706946
Gene end: 28742980
  
Corresponding Affymetrix probe sets: Dr.13106.1.S1_at (Zebrafish Array)   Dr.4351.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000104487
NCBI entrez gene - 563124     See in Manteia.
RefSeq - NM_001013266
RefSeq - XM_005158784
RefSeq Peptide - NP_001013284
swissprot - F1R1W1
ZFIN ID - ZDB-GENE-030616-405
Ensembl - ENSDARG00000001729
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STRN3ENSGALG00000040464Gallus gallus
 STRN3ENSG00000196792Homo sapiens
 Strn3ENSMUSG00000020954Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
strn / striatin, calmodulin binding protein / O43815* / striatin*ENSDARG0000010001157
strn4 / striatin, calmodulin binding protein 4 / Q9NRL3* / striatin 4*ENSDARG0000010290252
plrg1 / pleiotropic regulator 1 / O43660* / Q922V4*ENSDARG0000003728313


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013258  Striatin, N-terminal
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr