ENSDARG00000100011


Danio rerio

Features
Gene ID: ENSDARG00000100011
  
Biological name :strn
  
Synonyms : striatin, calmodulin binding protein / strn
  
Possible biological names infered from orthology : O43815 / O55106 / striatin
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 44804685
Gene end: 44855209
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139359
NCBI entrez gene - 791160     See in Manteia.
swissprot - A0A0H2UKU3
swissprot - A1L1U1
ZFIN ID - ZDB-GENE-070112-1172
Ensembl - ENSDARG00000100011
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 STRNENSGALG00000010580Gallus gallus
 STRNENSG00000115808Homo sapiens
 StrnENSMUSG00000024077Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
strn3 / striatin, calmodulin binding protein 3 / Q13033* / Q9ERG2* / striatin 3*ENSDARG0000000172952
strn4 / striatin, calmodulin binding protein 4 / Q9NRL3* / striatin 4*ENSDARG0000010290245
plrg1 / pleiotropic regulator 1 / O43660* / Q922V4*ENSDARG0000003728312


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR013258  Striatin, N-terminal
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr