ENSDARG00000002060


Danio rerio

Features
Gene ID: ENSDARG00000002060
  
Biological name :brf2
  
Synonyms : brf2 / BRF2, RNA polymerase III transcription initiation factor
  
Possible biological names infered from orthology : BRF2, RNA polymerase III transcription initiation factor subunit / Q9HAW0
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 41279007
Gene end: 41302909
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000148514
Ensembl peptide - ENSDARP00000006590
Ensembl peptide - ENSDARP00000120181
Ensembl peptide - ENSDARP00000130569
Ensembl peptide - ENSDARP00000140772
NCBI entrez gene - 445142     See in Manteia.
swissprot - F1QD13
swissprot - F1QIW1
ZFIN ID - ZDB-GENE-040801-43
Ensembl - ENSDARG00000002060
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BRF2ENSGALG00000003124Gallus gallus
 BRF2ENSG00000104221Homo sapiens
 Brf2ENSMUSG00000031487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000812  Transcription factor TFIIB
 IPR013137  Zinc finger, TFIIB-type
 IPR013763  Cyclin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0070897 DNA-templated transcriptional preinitiation complex assembly IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000041581 Q1LYE3 / znf143b / zinc finger protein 143b / P52747* / Zfp143* / ZNF143* / O70230* / zinc finger protein 143*  / complex / reaction
 ENSDARG00000014994 tbp / Q7SXL3 / TATA box binding protein / P20226* / P29037*  / complex






 

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