ENSGALG00000003124


Gallus gallus

Features
Gene ID: ENSGALG00000003124
  
Biological name :BRF2
  
Synonyms : BRF2 / BRF2, RNA polymerase III transcription initiation factor subunit
  
Possible biological names infered from orthology : Q9HAW0
  
Species: Gallus gallus
  
Chr. number: 22
Strand: -1
Band:
Gene start: 2238252
Gene end: 2241286
  
Corresponding Affymetrix probe sets: Gga.12313.1.S1_at (Chicken Array)   Gga.19948.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000028872
NCBI entrez gene - 426772     See in Manteia.
RefSeq - XM_424383
swissprot - E1C4I7
Ensembl - ENSGALG00000003124
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 brf2ENSDARG00000002060Danio rerio
 BRF2ENSG00000104221Homo sapiens
 Brf2ENSMUSG00000031487Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000812  Transcription factor TFIIB
 IPR013137  Zinc finger, TFIIB-type
 IPR013763  Cyclin-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006359 regulation of transcription by RNA polymerase III IEA
 biological_processGO:0034599 cellular response to oxidative stress IEA
 biological_processGO:0070897 DNA-templated transcriptional preinitiation complex assembly IEA
 molecular_functionGO:0001007 obsolete transcription factor activity, RNA polymerase III transcription factor binding IEA
 molecular_functionGO:0001032 RNA polymerase III type 3 promoter DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000011171 TBP / TATA-box-binding protein / P20226* / P29037*  / complex






 

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