ENSMUSG00000031487


Mus musculus

Features
Gene ID: ENSMUSG00000031487
  
Biological name :Brf2
  
Synonyms : Brf2 / BRF2, RNA polymerase III transcription initiation factor subunit
  
Possible biological names infered from orthology : Q9HAW0
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: A2
Gene start: 27123364
Gene end: 27128680
  
Corresponding Affymetrix probe sets: 10577948 (MoGene1.0st)   1429561_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000147259
Ensembl peptide - ENSMUSP00000147950
Ensembl peptide - ENSMUSP00000147895
Ensembl peptide - ENSMUSP00000147711
Ensembl peptide - ENSMUSP00000033877
NCBI entrez gene - 66653     See in Manteia.
MGI - MGI:1913903
RefSeq - NM_025686
RefSeq - XM_006509180
RefSeq Peptide - NP_079962
swissprot - A0A1B0GRY1
swissprot - A0A0R4J0C6
swissprot - A0A1B0GSD6
Ensembl - ENSMUSG00000031487
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 brf2ENSDARG00000002060Danio rerio
 BRF2ENSGALG00000003124Gallus gallus
 BRF2ENSG00000104221Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000812  Transcription factor TFIIB
 IPR013137  Zinc finger, TFIIB-type
 IPR036915  Cyclin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006359 regulation of transcription by RNA polymerase III IEA
 biological_processGO:0006413 translational initiation IEA
 biological_processGO:0034599 cellular response to oxidative stress IEA
 biological_processGO:0070897 DNA-templated transcriptional preinitiation complex assembly IEA
 molecular_functionGO:0001007 obsolete transcription factor activity, RNA polymerase III transcription factor binding IEA
 molecular_functionGO:0001032 RNA polymerase III type 3 promoter DNA binding IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000014767 Tbp / P29037 / TATA box binding protein / P20226*  / complex
 ENSMUSG00000049658 Bdp1 / Q571C7 / Transcription factor TFIIIB component B homolog / A6H8Y1* / B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB*  / complex
 ENSMUSG00000061079 O70230 / Zfp143 / zinc finger protein 143 / P52747* / ZNF143*  / complex / reaction
 ENSMUSG00000026565 P25425 / Pou2f1 / POU domain, class 2, transcription factor 1 / P14859* / POU class 2 homeobox 1*  / reaction / complex






 

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