ENSDARG00000003789


Danio rerio

Features
Gene ID: ENSDARG00000003789
  
Biological name :dennd5b
  
Synonyms : dennd5b / DENN/MADD domain containing 5B / Q6NXD8
  
Possible biological names infered from orthology : A2RSQ0 / DENN domain containing 5B / DENN domain-containing protein 5B / Q6ZUT9
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 16649542
Gene end: 16706978
  
Corresponding Affymetrix probe sets: Dr.2974.1.A1_at (Zebrafish Array)   NM_212644_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000073917
Ensembl peptide - ENSDARP00000112998
Ensembl peptide - ENSDARP00000113612
Ensembl peptide - ENSDARP00000119547
Ensembl peptide - ENSDARP00000032722
NCBI entrez gene - 323528     See in Manteia.
RefSeq - XM_009300252
RefSeq - NM_212644
RefSeq Peptide - NP_997809
swissprot - F6P656
swissprot - F1QQ55
swissprot - F6P9F3
swissprot - Q6NXD8
swissprot - Z4YIY0
ZFIN ID - ZDB-GENE-030131-2248
Ensembl - ENSDARG00000003789
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000045990Gallus gallus
 ENSGALG00000012944Gallus gallus
 Q6ZUT9ENSG00000170456Homo sapiens
 A2RSQ0ENSMUSG00000030313Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dennd5a / DENN/MADD domain containing 5A / Q6IQ26* / DENN domain containing 5A*ENSDARG0000001700665
dennd4c / DENN/MADD domain containing 4C / Q5VZ89* / DENN domain containing 4C*ENSDARG0000010276616
dennd4a / DENN/MADD domain containing 4A / Q7Z401* / DENN domain containing 4A*ENSDARG0000006272115
dennd4b / DENN/MADD domain containing 4B / O75064* / Q3U1Y4* / DENN domain containing 4B* / Mus musculus DENN/MADD domain containing 4B (Dennd4b), transcript variant 2, mRNA.*ENSDARG0000010291414
madd / MAP-kinase activating death domain / Q8WXG6*ENSDARG0000000349512
dennd3a / DENN/MADD domain containing 3a / A2RT67* / A2RUS2* / DENND3* / DENN domain containing 3* / DENN domain-containing protein 3 *ENSDARG0000007879711
st5 / suppression of tumorigenicity 5 / P78524* / Q924W7* / Suppression of tumorigenicity 5 protein *ENSDARG000000373639
si:dkey-76b14.2 / Q8CFK6* / Q8IV53* / DENND1C* / DENN domain containing 1C* / DENN domain-containing protein 1C *ENSDARG000000785039
dennd2db / DENN/MADD domain containing 2Db / Q9H6A0* / Q91VV4* / DENND2D* / DENN domain containing 2D* / DENN domain-containing protein 2D *ENSDARG000000302508
dennd2c / DENN/MADD domain containing 2C / Q68D51* / DENN domain containing 2C*ENSDARG000000737388
dennd2da / DENN/MADD domain containing 2Da / Q9H6A0* / Q91VV4* / DENND2D* / DENN domain containing 2D* / DENN domain-containing protein 2D *ENSDARG000000586667
dennd1a / DENN/MADD domain containing 1A / Q8K382* / Q8TEH3* / DENN domain containing 1A* / DENN domain-containing protein 1A *ENSDARG000000145927
dennd3b / DENN/MADD domain containing 3b / A2RT67* / A2RUS2* / DENND3* / DENN domain containing 3* / DENN domain-containing protein 3 *ENSDARG000000131536
dennd1b / DENN/MADD domain containing 1B / Q3U1T9* / Q6P3S1* / DENN domain containing 1B* / DENN domain-containing protein 1B *ENSDARG000001018685


Protein motifs (from Interpro)
Interpro ID Name
 IPR001024  PLAT/LH2 domain
 IPR001194  cDENN domain
 IPR004012  RUN domain
 IPR005112  dDENN domain
 IPR005113  uDENN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0050982 detection of mechanical stimulus IBA
 biological_processGO:0065009 regulation of molecular function IEA
 biological_processGO:0070588 calcium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IBA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005085 guanyl-nucleotide exchange factor activity IEA
 molecular_functionGO:0005262 calcium channel activity IBA
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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