ENSDARG00000003867


Danio rerio

Features
Gene ID: ENSDARG00000003867
  
Biological name :cdk20
  
Synonyms : A8WIP6 / cdk20 / cyclin-dependent kinase 20
  
Possible biological names infered from orthology : Q8IZL9 / Q9JHU3
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 7494941
Gene end: 7504201
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000113146
Ensembl peptide - ENSDARP00000144381
Ensembl peptide - ENSDARP00000116222
NCBI entrez gene - 494112     See in Manteia.
RefSeq - NM_001008655
RefSeq - XM_021478244
RefSeq Peptide - NP_001008655
swissprot - A8WIP6
swissprot - B2GQ42
swissprot - A8WIP7
ZFIN ID - ZDB-GENE-041212-84
Ensembl - ENSDARG00000003867
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDK20ENSG00000156345Homo sapiens
 Cdk20ENSMUSG00000021483Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdk7 / cyclin-dependent kinase 7 / P50613* / Q03147*ENSDARG0000005191640
cdkl1 / cyclin-dependent kinase-like 1 (CDC2-related kinase) / Q00532* / Q8CEQ0* / cyclin dependent kinase like 1*ENSDARG0000001732934
cdkl5 / cyclin-dependent kinase-like 5 / O76039* / Q3UTQ8*ENSDARG0000001524033


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0060271 cilium assembly IMP
 biological_processGO:1904031 positive regulation of cyclin-dependent protein kinase activity IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005675 holo TFIIH complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0070985 TFIIK complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0004693 cyclin-dependent protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008353 RNA polymerase II carboxy-terminal domain kinase activity IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0019912 cyclin-dependent protein kinase activating kinase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001115 trunk trunk kinked , abnormal
Show

 ZFA:0001117 post-vent region post-vent region increased curvature , abnormal
Show

 ZFA:0001287 renal tubule renal tubule cilium curled , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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