ENSDARG00000017329


Danio rerio

Features
Gene ID: ENSDARG00000017329
  
Biological name :cdkl1
  
Synonyms : cdkl1 / cyclin-dependent kinase-like 1 (CDC2-related kinase)
  
Possible biological names infered from orthology : cyclin dependent kinase like 1 / Q00532 / Q8CEQ0
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 36693152
Gene end: 36703164
  
Corresponding Affymetrix probe sets: Dr.15600.1.S1_at (Zebrafish Array)   NM_001003773_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000044356
NCBI entrez gene - 445316     See in Manteia.
RefSeq - NM_001003773
RefSeq Peptide - NP_001003773
swissprot - B8A6G8
ZFIN ID - ZDB-GENE-040808-34
Ensembl - ENSDARG00000017329
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDKL1ENSGALG00000012295Gallus gallus
 CDKL1ENSG00000100490Homo sapiens
 Cdkl1ENSMUSG00000020990Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdkl5 / cyclin-dependent kinase-like 5 / O76039* / Q3UTQ8*ENSDARG0000001524043
cdk20 / A8WIP6 / cyclin-dependent kinase 20 / Q8IZL9* / Q9JHU3*ENSDARG0000000386733
cdk7 / cyclin-dependent kinase 7 / P50613* / Q03147*ENSDARG0000005191633


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain malformed , abnormal
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 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
eye malformed , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk decreased length , abnormal
trunk increased curvature , abnormal
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 ZFA:0001117 post-vent region post-vent region kinked , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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