ENSDARG00000004261


Danio rerio

Features
Gene ID: ENSDARG00000004261
  
Biological name :tmed9
  
Synonyms : tmed9 / transmembrane p24 trafficking protein 9
  
Possible biological names infered from orthology : Q99KF1 / Q9BVK6
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 26404640
Gene end: 26411918
  
Corresponding Affymetrix probe sets: Dr.7695.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000004205
NCBI entrez gene - 613145     See in Manteia.
RefSeq - XM_005173178
swissprot - Q561X2
ZFIN ID - ZDB-GENE-050417-434
Ensembl - ENSDARG00000004261
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMED9ENSG00000184840Homo sapiens
 Tmed9ENSMUSG00000058569Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmed4 / transmembrane p24 trafficking protein 4 / Q7Z7H5* / Q8R1V4* / Transmembrane emp24 domain-containing protein 4 *ENSDARG0000002495477
si:ch211-255i20.3 / Q9D2R4* / Tmed11* / transmembrane p24 trafficking protein 11*ENSDARG0000007788042


Protein motifs (from Interpro)
Interpro ID Name
 IPR009038  GOLD domain
 IPR015720  TMP21-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000004261 tmed9 / transmembrane p24 trafficking protein 9 / Q99KF1* / Q9BVK6*  / complex
 ENSDARG00000035131 surf4l / surfeit gene 4, like / SURF4* / Q64310* / O15260* / surfeit 4* / Surfeit locus protein 4 *  / complex
 ENSDARG00000026908 tmed2 / transmembrane p24 trafficking protein 2 / Q15363* / Q9R0Q3*  / complex
 ENSDARG00000041391 tmed10 / transmembrane p24 trafficking protein 10 / P49755* / Q9D1D4* / Transmembrane emp24 domain-containing protein 10 *  / complex






 

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