ENSDARG00000041391


Danio rerio

Features
Gene ID: ENSDARG00000041391
  
Biological name :tmed10
  
Synonyms : tmed10 / transmembrane p24 trafficking protein 10
  
Possible biological names infered from orthology : P49755 / Q9D1D4 / Transmembrane emp24 domain-containing protein 10
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 46536598
Gene end: 46541843
  
Corresponding Affymetrix probe sets: Dr.26356.1.S1_at (Zebrafish Array)   NM_214698_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000060684
Ensembl peptide - ENSDARP00000153388
NCBI entrez gene - 326716     See in Manteia.
RefSeq - NM_214698
RefSeq - NM_001310040
RefSeq Peptide - NP_001296969
RefSeq Peptide - NP_999863
swissprot - Q6NWI7
ZFIN ID - ZDB-GENE-030131-4915
Ensembl - ENSDARG00000041391
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMED10ENSGALG00000010318Gallus gallus
 P49755ENSG00000170348Homo sapiens
 Q9D1D4ENSMUSG00000021248Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009038  GOLD domain
 IPR015720  TMP21-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
Cargo concentration in the ER
COPI-mediated anterograde transport
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000004261 tmed9 / transmembrane p24 trafficking protein 9 / Q99KF1* / Q9BVK6*  / complex
 ENSDARG00000035131 surf4l / surfeit gene 4, like / SURF4* / Q64310* / O15260* / surfeit 4* / Surfeit locus protein 4 *  / complex
 ENSDARG00000026908 tmed2 / transmembrane p24 trafficking protein 2 / Q15363* / Q9R0Q3*  / complex
 ENSDARG00000041391 tmed10 / transmembrane p24 trafficking protein 10 / P49755* / Q9D1D4* / Transmembrane emp24 domain-containing protein 10 *  / complex






 

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