ENSDARG00000005104


Danio rerio

Features
Gene ID: ENSDARG00000005104
  
Biological name :limk2
  
Synonyms : LIM domain kinase 2 / limk2
  
Possible biological names infered from orthology : O54785 / P53671
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 20823409
Gene end: 20863374
  
Corresponding Affymetrix probe sets: Dr.1225.1.A1_at (Zebrafish Array)   NM_001002651_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000116700
Ensembl peptide - ENSDARP00000087617
NCBI entrez gene - 436924     See in Manteia.
RefSeq - NM_001002651
RefSeq Peptide - NP_001002651
swissprot - A2BIG1
swissprot - Q6DG29
ZFIN ID - ZDB-GENE-040718-398
Ensembl - ENSDARG00000005104
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LIMK2ENSGALG00000006950Gallus gallus
 LIMK2ENSG00000182541Homo sapiens
 Limk2ENSMUSG00000020451Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
limk1a / LIM domain kinase 1a / LIMK1* / P53667* / LIM domain kinase 1*ENSDARG0000010346755
limk1b / LIM domain kinase 1b / LIMK1* / P53667* / P53668* / LIM domain kinase 1*ENSDARG0000000302246
si:dkeyp-75h12.2 / TESK1* / Q15569* / O70146* / testis-specific kinase 1* / Dual specificity testis-specific protein kinase 1 *ENSDARG0000007928120
si:ch211-113e8.3 / TESK1* / Q15569* / O70146* / testis-specific kinase 1* / Dual specificity testis-specific protein kinase 1 *ENSDARG0000007825119
tesk2 / testis-specific kinase 2 / Q8VCT9* / Q96S53* / Dual specificity testis-specific protein kinase 2 *ENSDARG0000006145018
zgc:113162ENSDARG0000005292317


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR001245  Serine-threonine/tyrosine-protein kinase, catalytic domain
 IPR001478  PDZ domain
 IPR001781  Zinc finger, LIM-type
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0035556 intracellular signal transduction IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IBA
 molecular_functionGO:0004871 obsolete signal transducer activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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