ENSDARG00000005834


Danio rerio

Features
Gene ID: ENSDARG00000005834
  
Biological name :gatad2b
  
Synonyms : gatad2b / GATA zinc finger domain containing 2B
  
Possible biological names infered from orthology : Q8VHR5 / Q8WXI9 / Transcriptional repressor p66-beta
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 41701660
Gene end: 41724246
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000036714
swissprot - F6NIQ9
ZFIN ID - ZDB-GENE-060503-655
Ensembl - ENSDARG00000005834
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8WXI9ENSG00000143614Homo sapiens
 Q8VHR5ENSMUSG00000042390Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gatad2ab / GATA zinc finger domain containing 2Ab / Q86YP4* / Q8CHY6* / GATAD2A* / Transcriptional repressor p66 alpha * / GATA zinc finger domain containing 2A*ENSDARG0000000619238


Protein motifs (from Interpro)
Interpro ID Name
 IPR000679  Zinc finger, GATA-type
 IPR013088  Zinc finger, NHR/GATA-type
 IPR032346  Transcriptional repressor p66, coiled-coil MBD2-interaction domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045879 negative regulation of smoothened signaling pathway IMP
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Acetylation
RNA Polymerase I Transcription Initiation
Regulation of PTEN gene transcription


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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