ENSDARG00000005916


Danio rerio

Features
Gene ID: ENSDARG00000005916
  
Biological name :srpk3
  
Synonyms : srpk3 / SRSF protein kinase 3
  
Possible biological names infered from orthology : Q9UPE1 / Q9Z0G2 / serine/arginine-rich protein specific kinase 3
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 8291492
Gene end: 8339372
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135792
Ensembl peptide - ENSDARP00000125735
NCBI entrez gene - 566605     See in Manteia.
RefSeq - XM_689881
swissprot - I3IS69
swissprot - A0A0R4INZ7
ZFIN ID - ZDB-GENE-101025-2
Ensembl - ENSDARG00000005916
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRPK3ENSG00000184343Homo sapiens
 Srpk3ENSMUSG00000002007Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
srpk1b / SRSF protein kinase 1b / SRPK1* / Q96SB4* / O70551* / SRSF protein kinase 1*ENSDARG0000003156048
srpk1a / SRSF protein kinase 1a / SRPK1* / Q96SB4* / O70551* / SRSF protein kinase 1*ENSDARG0000007399747
si:ch211-220i18.4ENSDARG0000003026228
FP236318.1 / SRPK2* / P78362* / SRSF protein kinase 2*ENSDARG0000011048517
CABZ01113818.1 / SRPK2* / P78362* / SRSF protein kinase 2*ENSDARG0000011014217
FP236318.2 / SRPK2* / P78362* / SRSF protein kinase 2*ENSDARG0000011487413


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly IBA
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0035556 intracellular signal transduction IBA
 biological_processGO:0050684 regulation of mRNA processing IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr