ENSDARG00000031560


Danio rerio

Features
Gene ID: ENSDARG00000031560
  
Biological name :srpk1b
  
Synonyms : srpk1b / SRSF protein kinase 1b
  
Possible biological names infered from orthology : O70551 / Q96SB4 / SRPK1 / SRSF protein kinase 1
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 2763168
Gene end: 2826562
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000042971
NCBI entrez gene - 791187     See in Manteia.
RefSeq - NM_001080669
RefSeq - XM_005155658
RefSeq Peptide - NP_001074138
swissprot - F1REN8
ZFIN ID - ZDB-GENE-070112-2292
Ensembl - ENSDARG00000031560
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRPK1ENSGALG00000037546Gallus gallus
 SRPK1ENSG00000096063Homo sapiens
 Srpk1ENSMUSG00000004865Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
srpk1a / SRSF protein kinase 1a / SRPK1* / Q96SB4* / O70551* / SRSF protein kinase 1*ENSDARG0000007399766
srpk3 / SRSF protein kinase 3 / Q9UPE1* / Q9Z0G2* / serine/arginine-rich protein specific kinase 3*ENSDARG0000000591652
si:ch211-220i18.4ENSDARG0000003026229
CABZ01113818.1 / SRPK2* / P78362* / SRSF protein kinase 2*ENSDARG0000011014220
FP236318.1 / SRPK2* / P78362* / SRSF protein kinase 2*ENSDARG0000011048520
FP236318.2 / SRPK2* / P78362* / SRSF protein kinase 2*ENSDARG0000011487414


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly IBA
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0035556 intracellular signal transduction IBA
 biological_processGO:0050684 regulation of mRNA processing IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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