ENSDARG00000073997


Danio rerio

Features
Gene ID: ENSDARG00000073997
  
Biological name :srpk1a
  
Synonyms : srpk1a / SRSF protein kinase 1a
  
Possible biological names infered from orthology : O70551 / Q96SB4 / SRPK1 / SRSF protein kinase 1
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 23861461
Gene end: 23879395
  
Corresponding Affymetrix probe sets: Dr.26334.1.A1_at (Zebrafish Array)   Dr.7903.1.S1_at (Zebrafish Array)   NM_199650_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000032398
NCBI entrez gene - 323679     See in Manteia.
RefSeq - NM_199650
RefSeq Peptide - NP_955944
swissprot - A8Y5S5
ZFIN ID - ZDB-GENE-030131-2399
Ensembl - ENSDARG00000073997
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRPK1ENSGALG00000037546Gallus gallus
 SRPK1ENSG00000096063Homo sapiens
 Srpk1ENSMUSG00000004865Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
srpk1b / SRSF protein kinase 1b / SRPK1* / Q96SB4* / O70551* / SRSF protein kinase 1*ENSDARG0000003156068
srpk3 / SRSF protein kinase 3 / Q9UPE1* / Q9Z0G2* / serine/arginine-rich protein specific kinase 3*ENSDARG0000000591653
si:ch211-220i18.4ENSDARG0000003026229
CABZ01113818.1 / SRPK2* / P78362* / SRSF protein kinase 2*ENSDARG0000011014221
FP236318.1 / SRPK2* / P78362* / SRSF protein kinase 2*ENSDARG0000011048521
FP236318.2 / SRPK2* / P78362* / SRSF protein kinase 2*ENSDARG0000011487414


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR017441  Protein kinase, ATP binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly IBA
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0035556 intracellular signal transduction IBA
 biological_processGO:0050684 regulation of mRNA processing IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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