ENSDARG00000006062


Danio rerio

Features
Gene ID: ENSDARG00000006062
  
Biological name :akap1b
  
Synonyms : akap1b / A kinase (PRKA) anchor protein 1b
  
Possible biological names infered from orthology : AKAP1 / A-kinase anchoring protein 1 / A-kinase anchor protein 1, mitochondrial / O08715 / Q92667
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 30836981
Gene end: 30857350
  
Corresponding Affymetrix probe sets: Dr.13188.2.A1_a_at (Zebrafish Array)   Dr.244.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115383
Ensembl peptide - ENSDARP00000099189
NCBI entrez gene - 556208     See in Manteia.
RefSeq - XM_017350962
RefSeq - NM_001098179
RefSeq Peptide - NP_001091649
swissprot - F6NHG9
swissprot - F1RBY1
ZFIN ID - ZDB-GENE-030131-6844
Ensembl - ENSDARG00000006062
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AKAP1ENSGALG00000005575Gallus gallus
 AKAP1ENSG00000121057Homo sapiens
 Akap1ENSMUSG00000018428Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
akap1a / A kinase (PRKA) anchor protein 1aENSDARG0000008980227


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR004087  K Homology domain
 IPR004088  K Homology domain, type 1
 IPR033104  A-kinase anchor protein 1, mitochondrial
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010738 regulation of protein kinase A signaling IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0034237 protein kinase A regulatory subunit binding IEA


Pathways (from Reactome)
Pathway description
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000033184 prkar2aa / protein kinase, cAMP-dependent, regulatory, type II, alpha A / P13861* / PRKAR2A* / protein kinase, cAMP dependent regulatory, type II alpha* / protein kinase cAMP-dependent type...  / complex / reaction
 ENSDARG00000059125 prkacbb / protein kinase, cAMP-dependent, catalytic, beta b / P22694* / PRKACB* / protein kinase cAMP-activated catalytic subunit beta*  / complex / reaction
 ENSDARG00000103800 prkar1b / protein kinase, cAMP-dependent, regulatory, type I, beta / P12849* / P31321* / protein kinase cAMP-dependent type I regulatory subunit beta*  / complex / reaction
 ENSDARG00000009477 prkar2ab / protein kinase, cAMP-dependent, regulatory, type II, alpha, B / P13861* / PRKAR2A* / protein kinase cAMP-dependent type II regulatory subunit alpha*  / reaction / complex






 

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