ENSDARG00000007250


Danio rerio

Features
Gene ID: ENSDARG00000007250
  
Biological name :use1
  
Synonyms : unconventional SNARE in the ER 1 homolog (S. cerevisiae) / use1
  
Possible biological names infered from orthology : Q9CQ56 / Q9NZ43 / unconventional SNARE in the ER 1
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 11070842
Gene end: 11079068
  
Corresponding Affymetrix probe sets: Dr.5969.1.S1_at (Zebrafish Array)   NM_200324_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000024706
Ensembl peptide - ENSDARP00000105274
NCBI entrez gene - 393294     See in Manteia.
RefSeq - NM_200324
RefSeq Peptide - NP_956618
swissprot - Q1LVG2
swissprot - Q1LVG3
ZFIN ID - ZDB-GENE-040426-1015
Ensembl - ENSDARG00000007250
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 USE1ENSGALG00000003703Gallus gallus
 USE1ENSG00000053501Homo sapiens
 Use1ENSMUSG00000002395Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019150  Vesicle transport protein, Use1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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