ENSGALG00000003703


Gallus gallus

Features
Gene ID: ENSGALG00000003703
  
Biological name :USE1
  
Synonyms : USE1 / vesicle transport protein USE1
  
Possible biological names infered from orthology : Q9CQ56 / Q9NZ43 / unconventional SNARE in the ER 1 / unconventional SNARE in the ER 1 homolog (S. cerevisiae)
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 4172071
Gene end: 4176936
  
Corresponding Affymetrix probe sets: Gga.15986.1.S1_s_at (Chicken Array)   GgaAffx.11370.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000005858
NCBI entrez gene - 420134     See in Manteia.
RefSeq - NM_001030939
RefSeq - XM_015300057
RefSeq Peptide - NP_001026110
swissprot - F6YX81
Ensembl - ENSGALG00000003703
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 use1ENSDARG00000007250Danio rerio
 USE1ENSG00000053501Homo sapiens
 Use1ENSMUSG00000002395Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019150  Vesicle transport protein, Use1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001055 NSF / P46459* / P46460* / Vesicle-fusing ATPase * / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / complex / reaction
 ENSGALG00000002882 BNIP1 / BCL2 interacting protein 1 / Q12981* / Q6QD59* / Vesicle transport protein SEC20 *  / complex
 ENSGALG00000015012 STX18 / syntaxin 18 / Q8VDS8* / Q9P2W9*  / complex
 ENSGALG00000040155 ZW10 / zw10 kinetochore protein / O43264* / O54692*  / reaction
 ENSGALG00000039704 Q5ZJW4 / SEC22B / Vesicle-trafficking protein SEC22b / O08547* / O75396* / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)*  / complex






 

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