ENSGALG00000015012


Gallus gallus

Features
Gene ID: ENSGALG00000015012
  
Biological name :STX18
  
Synonyms : STX18 / syntaxin 18
  
Possible biological names infered from orthology : Q8VDS8 / Q9P2W9
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 79189247
Gene end: 79244141
  
Corresponding Affymetrix probe sets: Gga.12237.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024162
Ensembl peptide - ENSGALP00000060766
NCBI entrez gene - 422848     See in Manteia.
RefSeq - NM_001252158
RefSeq - XM_015285761
RefSeq Peptide - NP_001239087
swissprot - E1C1M8
swissprot - A0A1L1RPP3
Ensembl - ENSGALG00000015012
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stx18ENSDARG00000035763Danio rerio
 STX18ENSG00000168818Homo sapiens
 Stx18ENSMUSG00000029125Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006012  Syntaxin/epimorphin, conserved site
 IPR019529  SNARE-complex protein Syntaxin-18, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER IBA
 biological_processGO:0061025 membrane fusion IEA
 biological_processGO:0090158 endoplasmic reticulum membrane organization IEA
 biological_processGO:1902117 positive regulation of organelle assembly IEA
 biological_processGO:1902953 positive regulation of ER to Golgi vesicle-mediated transport IEA
 biological_processGO:1903358 regulation of Golgi organization IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031201 SNARE complex IBA
 molecular_functionGO:0005484 SNAP receptor activity IEA
 molecular_functionGO:0019904 protein domain specific binding IEA


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000001055 NSF / P46459* / P46460* / Vesicle-fusing ATPase * / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / complex / reaction
 ENSGALG00000002882 BNIP1 / BCL2 interacting protein 1 / Q12981* / Q6QD59* / Vesicle transport protein SEC20 *  / complex
 ENSGALG00000003703 USE1 / vesicle transport protein USE1 / Q9CQ56* / Q9NZ43* / unconventional SNARE in the ER 1* / unconventional SNARE in the ER 1 homolog (S. cerevisiae)*  / complex
 ENSGALG00000040155 ZW10 / zw10 kinetochore protein / O43264* / O54692*  / reaction
 ENSGALG00000039704 Q5ZJW4 / SEC22B / Vesicle-trafficking protein SEC22b / O08547* / O75396* / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)*  / complex






 

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