ENSGALG00000002882


Gallus gallus

Features
Gene ID: ENSGALG00000002882
  
Biological name :BNIP1
  
Synonyms : BCL2 interacting protein 1 / BNIP1
  
Possible biological names infered from orthology : Q12981 / Q6QD59 / Vesicle transport protein SEC20
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 9179299
Gene end: 9184374
  
Corresponding Affymetrix probe sets: Gga.12638.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004536
NCBI entrez gene - 416207     See in Manteia.
RefSeq - XM_414533
swissprot - F1NC47
Ensembl - ENSGALG00000002882
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bnip1aENSDARG00000078259Danio rerio
 bnip1bENSDARG00000104280Danio rerio
 BNIP1ENSG00000113734Homo sapiens
 Bnip1ENSMUSG00000024191Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005606  Sec20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007029 endoplasmic reticulum organization IEA
 biological_processGO:0016320 endoplasmic reticulum membrane fusion IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0031201 SNARE complex IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0005484 SNAP receptor activity IEA


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003703 USE1 / vesicle transport protein USE1 / Q9CQ56* / Q9NZ43* / unconventional SNARE in the ER 1* / unconventional SNARE in the ER 1 homolog (S. cerevisiae)*  / complex
 ENSGALG00000001055 NSF / P46459* / P46460* / Vesicle-fusing ATPase * / N-ethylmaleimide sensitive factor, vesicle fusing ATPase*  / reaction / complex
 ENSGALG00000015012 STX18 / syntaxin 18 / Q8VDS8* / Q9P2W9*  / complex
 ENSGALG00000040155 ZW10 / zw10 kinetochore protein / O43264* / O54692*  / reaction
 ENSGALG00000039704 Q5ZJW4 / SEC22B / Vesicle-trafficking protein SEC22b / O08547* / O75396* / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)*  / complex






 

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