ENSG00000113734


Homo sapiens

Features
Gene ID: ENSG00000113734
  
Biological name :BNIP1
  
Synonyms : BCL2 interacting protein 1 / BNIP1 / Q12981
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q35.1
Gene start: 173144442
Gene end: 173164387
  
Corresponding Affymetrix probe sets: 204930_s_at (Human Genome U133 Plus 2.0 Array)   207829_s_at (Human Genome U133 Plus 2.0 Array)   37226_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000239214
Ensembl peptide - ENSP00000377365
Ensembl peptide - ENSP00000429717
Ensembl peptide - ENSP00000231668
Ensembl peptide - ENSP00000239215
NCBI entrez gene - 662     See in Manteia.
OMIM - 603291
RefSeq - XM_011534639
RefSeq - NM_001205
RefSeq - NM_013978
RefSeq - NM_013979
RefSeq - NM_013980
RefSeq - XM_011534638
RefSeq Peptide - NP_053581
RefSeq Peptide - NP_053582
RefSeq Peptide - NP_053583
RefSeq Peptide - NP_001196
swissprot - Q12981
swissprot - H0YBK7
Ensembl - ENSG00000113734
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bnip1aENSDARG00000078259Danio rerio
 bnip1bENSDARG00000104280Danio rerio
 BNIP1ENSGALG00000002882Gallus gallus
 Bnip1ENSMUSG00000024191Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005606  Sec20


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER TAS
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0006915 apoptotic process IPI
 biological_processGO:0007029 endoplasmic reticulum organization IMP
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0016320 endoplasmic reticulum membrane fusion IMP
 biological_processGO:0043066 negative regulation of apoptotic process TAS
 biological_processGO:0097194 execution phase of apoptosis IC
 cellular_componentGO:0005635 nuclear envelope IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane TAS
 cellular_componentGO:0031201 SNARE complex IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0005484 SNAP receptor activity IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000086827 ZW10 / O43264 / zw10 kinetochore protein  / reaction
 ENSG00000168818 STX18 / Q9P2W9 / syntaxin 18  / complex
 ENSG00000053501 USE1 / Q9NZ43 / unconventional SNARE in the ER 1  / complex
 ENSG00000135249 RINT1 / Q6NUQ1 / RAD50 interactor 1  / reaction
 ENSG00000105402 NAPA / P54920 / NSF attachment protein alpha  / reaction / complex
 ENSG00000151779 NBAS / A2RRP1 / neuroblastoma amplified sequence  / reaction
 ENSG00000073969 NSF / P46459 / N-ethylmaleimide sensitive factor, vesicle fusing ATPase  / complex / reaction
 ENSG00000265808 O75396 / SEC22B / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)  / complex






 

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