ENSG00000053501


Homo sapiens

Features
Gene ID: ENSG00000053501
  
Biological name :USE1
  
Synonyms : Q9NZ43 / unconventional SNARE in the ER 1 / USE1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: p13.11
Gene start: 17215346
Gene end: 17219829
  
Corresponding Affymetrix probe sets: 219348_at (Human Genome U133 Plus 2.0 Array)   221706_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000472362
Ensembl peptide - ENSP00000473239
Ensembl peptide - ENSP00000263897
Ensembl peptide - ENSP00000390287
Ensembl peptide - ENSP00000469658
Ensembl peptide - ENSP00000470065
Ensembl peptide - ENSP00000470487
Ensembl peptide - ENSP00000470882
NCBI entrez gene - 55850     See in Manteia.
OMIM - 610675
RefSeq - XM_017026976
RefSeq - NM_018467
RefSeq - XM_017026975
RefSeq Peptide - NP_060937
swissprot - M0QZZ6
swissprot - G8JLK1
swissprot - Q9NZ43
swissprot - M0QYT5
swissprot - M0QZE0
Ensembl - ENSG00000053501
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 use1ENSDARG00000007250Danio rerio
 USE1ENSGALG00000003703Gallus gallus
 Use1ENSMUSG00000002395Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019150  Vesicle transport protein, Use1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER TAS
 biological_processGO:0007041 lysosomal transport ISS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0030163 protein catabolic process ISS
 biological_processGO:0032940 secretion by cell ISS
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000086827 ZW10 / O43264 / zw10 kinetochore protein  / reaction
 ENSG00000168818 STX18 / Q9P2W9 / syntaxin 18  / complex
 ENSG00000113734 BNIP1 / Q12981 / BCL2 interacting protein 1  / complex
 ENSG00000135249 RINT1 / Q6NUQ1 / RAD50 interactor 1  / reaction
 ENSG00000105402 NAPA / P54920 / NSF attachment protein alpha  / reaction / complex
 ENSG00000151779 NBAS / A2RRP1 / neuroblastoma amplified sequence  / reaction
 ENSG00000073969 NSF / P46459 / N-ethylmaleimide sensitive factor, vesicle fusing ATPase  / reaction / complex
 ENSG00000265808 O75396 / SEC22B / SEC22 homolog B, vesicle trafficking protein (gene/pseudogene)  / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr