ENSDARG00000007347


Danio rerio

Features
Gene ID: ENSDARG00000007347
  
Biological name :degs1
  
Synonyms : degs1 / delta(4)-desaturase, sphingolipid 1
  
Possible biological names infered from orthology : 9130409I23Rik / O09005 / O15121 / RIKEN cDNA 9130409I23 gene / Sphingolipid delta(4)-desaturase DES1
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 502230
Gene end: 514843
  
Corresponding Affymetrix probe sets: Dr.1251.1.S1_at (Zebrafish Array)   NM_212700_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000008702
NCBI entrez gene - 327075     See in Manteia.
RefSeq - NM_212700
RefSeq Peptide - NP_997865
swissprot - B8A4A2
ZFIN ID - ZDB-GENE-030131-5283
Ensembl - ENSDARG00000007347
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DEGS1ENSGALG00000009330Gallus gallus
 DEGS1ENSG00000143753Homo sapiens
 9130409I23RikENSMUSG00000038768Mus musculus
 Degs1ENSMUSG00000038633Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
degs2 / delta(4)-desaturase, sphingolipid 2 / Q6QHC5* / Q8R2F2* / Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 *ENSDARG0000004254470


Protein motifs (from Interpro)
Interpro ID Name
 IPR005804  Fatty acid desaturase domain
 IPR011388  Sphingolipid delta4-desaturase
 IPR013866  Sphingolipid delta4-desaturase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0030148 sphingolipid biosynthetic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0042284 sphingolipid delta-4 desaturase activity IEA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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