ENSDARG00000042544


Danio rerio

Features
Gene ID: ENSDARG00000042544
  
Biological name :degs2
  
Synonyms : degs2 / delta(4)-desaturase, sphingolipid 2
  
Possible biological names infered from orthology : Q6QHC5 / Q8R2F2 / Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 30894431
Gene end: 30900380
  
Corresponding Affymetrix probe sets: Dr.17314.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000110231
NCBI entrez gene - 402799     See in Manteia.
swissprot - F1QW74
ZFIN ID - ZDB-GENE-080228-1
Ensembl - ENSDARG00000042544
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DEGS2ENSGALG00000011213Gallus gallus
 DEGS2ENSG00000168350Homo sapiens
 Degs2ENSMUSG00000021263Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
degs1 / delta(4)-desaturase, sphingolipid 1 / O15121* / O09005* / 9130409I23Rik* / RIKEN cDNA 9130409I23 gene* / Sphingolipid delta(4)-desaturase DES1 *ENSDARG0000000734770


Protein motifs (from Interpro)
Interpro ID Name
 IPR005804  Fatty acid desaturase domain
 IPR011388  Sphingolipid delta4-desaturase
 IPR013866  Sphingolipid delta4-desaturase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0030148 sphingolipid biosynthetic process IEA
 biological_processGO:0046513 ceramide biosynthetic process IBA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000170 sphingosine hydroxylase activity IBA
 molecular_functionGO:0042284 sphingolipid delta-4 desaturase activity IBA


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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