ENSDARG00000009822


Danio rerio

Features
Gene ID: ENSDARG00000009822
  
Biological name :her4.4
  
Synonyms : hairy-related 4, tandem duplicate 4 / her4.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 21462021
Gene end: 21463788
  
Corresponding Affymetrix probe sets: Dr.5372.9.S1_s_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000073721
NCBI entrez gene - 100149066     See in Manteia.
RefSeq - NM_001128390
RefSeq Peptide - NP_001121862
swissprot - B0V3D3
ZFIN ID - ZDB-GENE-081031-104
Ensembl - ENSDARG00000009822
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
her4.1 / hairy-related 4, tandem duplicate 1ENSDARG0000005673299
her4.2 / hairy-related 4, tandem duplicate 2ENSDARG0000005672998
her4.3 / hairy-related 4, tandem duplicate 3ENSDARG0000007077098
her4.2 / her4.4 / hairy-related 4, tandem duplicate 2ENSDARG0000009442698
her15.1 / hairy and enhancer of split-related 15, tandem duplicate 1ENSDARG0000005456236
her15.2 / hairy and enhancer of split-related 15, tandem duplicate 2ENSDARG0000005456036
her12 / hairy-related 12ENSDARG0000003296333
her2 / hairy-related 2 / HES5* / Q5TA89* / hes family bHLH transcription factor 5*ENSDARG0000003820525


Protein motifs (from Interpro)
Interpro ID Name
 IPR003650  Orange domain
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0048936 peripheral nervous system neuron axonogenesis IGI
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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