ENSDARG00000032963


Danio rerio

Features
Gene ID: ENSDARG00000032963
  
Biological name :her12
  
Synonyms : hairy-related 12 / her12
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 21444922
Gene end: 21446985
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000044079
NCBI entrez gene - 402914     See in Manteia.
RefSeq - NM_205619
RefSeq Peptide - NP_991182
swissprot - Q6TA36
ZFIN ID - ZDB-GENE-040824-5
Ensembl - ENSDARG00000032963
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
her15.1 / hairy and enhancer of split-related 15, tandem duplicate 1ENSDARG0000005456250
her15.2 / hairy and enhancer of split-related 15, tandem duplicate 2ENSDARG0000005456050
her4.2 / her4.4 / hairy-related 4, tandem duplicate 2ENSDARG0000009442633
her4.2 / hairy-related 4, tandem duplicate 2ENSDARG0000005672933
her4.3 / hairy-related 4, tandem duplicate 3ENSDARG0000007077032
her4.1 / hairy-related 4, tandem duplicate 1ENSDARG0000005673232
her4.4 / hairy-related 4, tandem duplicate 4ENSDARG0000000982232
her2 / hairy-related 2 / HES5* / Q5TA89* / hes family bHLH transcription factor 5*ENSDARG0000003820530


Protein motifs (from Interpro)
Interpro ID Name
 IPR003650  Orange domain
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001756 somitogenesis IMP
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007219 Notch signaling pathway IGI
 biological_processGO:0007420 brain development IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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