ENSDARG00000010434


Danio rerio

Features
Gene ID: ENSDARG00000010434
  
Biological name :clu
  
Synonyms : clu / clusterin
  
Possible biological names infered from orthology : Clusterin Clusterin beta chain Clusterin alpha chain / P10909 / Q06890
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 39260475
Gene end: 39273987
  
Corresponding Affymetrix probe sets: Dr.20131.2.A1_at (Zebrafish Array)   NM_200802_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000127463
Ensembl peptide - ENSDARP00000110504
Ensembl peptide - ENSDARP00000115308
Ensembl peptide - ENSDARP00000151700
NCBI entrez gene - 393775     See in Manteia.
RefSeq - NM_200802
RefSeq Peptide - NP_957096
swissprot - F1Q875
swissprot - Q5SPR2
swissprot - U3JB41
ZFIN ID - ZDB-GENE-040426-1774
Ensembl - ENSDARG00000010434
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLUENSGALG00000043051Gallus gallus
 CLUENSG00000120885Homo sapiens
 CluENSMUSG00000022037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clul1 / clusterin-like 1 (retinal) / Q15846* / clusterin like 1*ENSDARG0000005559523


Protein motifs (from Interpro)
Interpro ID Name
 IPR000753  Clusterin-like
 IPR016014  Clusterin, N-terminal
 IPR016015  Clusterin, C-terminal
 IPR016016  Clusterin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1901214 regulation of neuron death IMP
 cellular_componentGO:0005576 extracellular region IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Terminal pathway of complement
Regulation of Complement cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain apoptotic , abnormal
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 ZFA:0000075 spinal cord spinal cord apoptotic , abnormal
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 ZFA:0000076 swim bladder swim bladder uninflated , abnormal
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 ZFA:0009248 neuron neuron cell death increased occurrence , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr