ENSDARG00000010563


Danio rerio

Features
Gene ID: ENSDARG00000010563
  
Biological name :spopla
  
Synonyms : Q5BL35 / speckle-type POZ protein-like a / spopla / spoplb
  
Possible biological names infered from orthology : Q2M2N2 / Q6IQ16 / speckle type BTB/POZ protein like / Speckle-type POZ protein-like / SPOPL
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 10050890
Gene end: 10068105
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134710
Ensembl peptide - ENSDARP00000026361
NCBI entrez gene - 541318     See in Manteia.
RefSeq - NM_001013447
RefSeq Peptide - NP_001013465
swissprot - A0A0R4IIR0
swissprot - Q5BL35
ZFIN ID - ZDB-GENE-050320-3
ZFIN ID - ZDB-GENE-061103-277
Ensembl - ENSDARG00000010563
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPOPLENSGALG00000012380Gallus gallus
 SPOPLENSG00000144228Homo sapiens
 SpoplENSMUSG00000026771Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A0JMG1 / spoplb / speckle-type POZ protein-like bENSDARG0000000397495
spop / Q7T330 / speckle-type POZ protein / Gm5773* / Gm9117* / Gm9125* / O43791* / P0DMR5* / P0DMR6* / Tdpoz5* / Gm4778* / Gm4858* / Gm5286* / Q6YCH2* / Q6ZWS8* / Q717B2* / Q717B4* / Tdpoz1...ENSDARG0000010051982
si:dkey-260j18.2ENSDARG0000010194213
kbtbd4 / kelch repeat and BTB (POZ) domain containing 4 / Q9NVX7* / Q8R179* / kelch repeat and BTB domain containing 4* / Kelch repeat and BTB domain-containing protein 4 *ENSDARG0000006927112


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR002083  MATH/TRAF domain
 IPR008974  TRAF-like
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR034089  SPOP, C-terminal BACK-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030162 regulation of proteolysis IBA
 biological_processGO:0031397 negative regulation of protein ubiquitination ISS
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0019005 SCF ubiquitin ligase complex IBA
 cellular_componentGO:0031463 Cul3-RING ubiquitin ligase complex ISS
 molecular_functionGO:0031625 ubiquitin protein ligase binding IBA


Pathways (from Reactome)
Pathway description
Hedgehog on state


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000100519 spop / Q7T330 / speckle-type POZ protein / Gm5773* / Gm9117* / Gm9125* / O43791* / P0DMR5* / P0DMR6* / Tdpoz5* / Gm4778* / Gm4858* / Gm5286* / Q6YCH2* / Q6ZWS8* / Q717B2* / Q717B4* / Tdpoz1...  / complex






 

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