ENSDARG00000011113


Danio rerio

Features
Gene ID: ENSDARG00000011113
  
Biological name :chrna10a
  
Synonyms : cholinergic receptor, nicotinic, alpha 10a / chrna10a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 38179904
Gene end: 38193383
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000015717
Ensembl peptide - ENSDARP00000127070
NCBI entrez gene - 556507     See in Manteia.
RefSeq - NM_001044804
RefSeq Peptide - NP_001038269
swissprot - Q1LY90
swissprot - R4GF05
ZFIN ID - ZDB-GENE-060503-725
Ensembl - ENSDARG00000011113
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHRNA10ENSGALG00000022702Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CR847523.1ENSDARG0000010811866
chrna9 / cholinergic receptor, nicotinic, alpha 9 / Q9UGM1* / cholinergic receptor nicotinic alpha 9 subunit* / cholinergic receptor, nicotinic, alpha polypeptide 9*ENSDARG0000005468056
LO018568.1 / CHRNA9* / Q9UGM1* / cholinergic receptor nicotinic alpha 9 subunit*ENSDARG0000009918153
si:ch73-380n15.2ENSDARG0000008722434
FO907089.1 / Q494W8* / CHRNA7* / P36544* / CHRFAM7A* / cholinergic receptor nicotinic alpha 7 subunit* / CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion*ENSDARG0000010152233
si:ch211-39a7.1ENSDARG0000003742732
chrna7 / cholinergic receptor, nicotinic, alpha 7 (neuronal) / Q494W8* / P36544* / P49582* / CHRFAM7A* / cholinergic receptor nicotinic alpha 7 subunit* / CHRNA7 (exons 5-10) and FAM7A (exo...ENSDARG0000010170232
chrnb1l / cholinergic receptor, nicotinic, beta 1 (muscle) like / CHRNB1* / P09690* / P11230* / cholinergic receptor nicotinic beta 1 subunit* / cholinergic receptor, nicotinic, beta polype...ENSDARG0000002253226
chrnd / cholinergic receptor, nicotinic, delta (muscle) / P02716* / Q07001* / cholinergic receptor nicotinic delta subunit* / cholinergic receptor, nicotinic, delta polypeptide*ENSDARG0000001934225
chrnb1 / cholinergic receptor, nicotinic, beta 1 (muscle) / P09690* / P11230* / cholinergic receptor nicotinic beta 1 subunit* / cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)*ENSDARG0000006966024
chrng / cholinergic receptor, nicotinic, gamma / P07510* / cholinergic receptor nicotinic gamma subunit*ENSDARG0000008664723
chrne / cholinergic receptor, nicotinic, epsilon / P20782* / Q04844* / cholinergic receptor nicotinic epsilon subunit* / cholinergic receptor, nicotinic, epsilon polypeptide*ENSDARG0000003430723
FO818743.1ENSDARG0000010267518
htr3a / 5-hydroxytryptamine (serotonin) receptor 3A / P46098* / 5-hydroxytryptamine receptor 3A*ENSDARG0000008921218
si:ch211-256e16.4ENSDARG0000007842817
htr3b / 5-hydroxytryptamine (serotonin) receptor 3B / O95264* / Q9JHJ5* / 5-hydroxytryptamine receptor 3B*ENSDARG0000006174916
HTR3C / 5-hydroxytryptamine receptor 3C / HTR3D* / HTR3E* / A5X5Y0* / Q8WXA8* / Q70Z44* / 5-hydroxytryptamine receptor 3D* / 5-hydroxytryptamine receptor 3E*ENSDARG0000007795914
si:ch211-256e16.6ENSDARG0000007960313
si:ch211-256e16.10ENSDARG0000009756610
si:dkey-49c17.4ENSDARG000000748249


Protein motifs (from Interpro)
Interpro ID Name
 IPR002394  Nicotinic acetylcholine receptor
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0060078 regulation of postsynaptic membrane potential IEA
 biological_processGO:0060079 excitatory postsynaptic potential IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0045211 postsynaptic membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA
 molecular_functionGO:0022848 acetylcholine-gated cation-selective channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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