ENSDARG00000097566


Danio rerio

Features
Gene ID: ENSDARG00000097566
  
Biological name :si:ch211-256e16.10
  
Synonyms : si:ch211-256e16.10
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 58039261
Gene end: 58046319
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129841
swissprot - X1WHX6
ZFIN ID - ZDB-GENE-131121-244
Ensembl - ENSDARG00000097566
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000026015Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-256e16.6ENSDARG0000007960375
si:ch211-256e16.4ENSDARG0000007842861
si:ch211-256e16.7ENSDARG0000009682149
FO818743.1ENSDARG0000010267536
si:dkey-49c17.4ENSDARG0000007482433
htr3a / 5-hydroxytryptamine (serotonin) receptor 3A / P46098* / 5-hydroxytryptamine receptor 3A*ENSDARG0000008921232
HTR3C / 5-hydroxytryptamine receptor 3C / HTR3D* / HTR3E* / A5X5Y0* / Q8WXA8* / Q70Z44* / 5-hydroxytryptamine receptor 3D* / 5-hydroxytryptamine receptor 3E*ENSDARG0000007795930
htr3b / 5-hydroxytryptamine (serotonin) receptor 3B / O95264* / Q9JHJ5* / 5-hydroxytryptamine receptor 3B*ENSDARG0000006174926
chrna9 / cholinergic receptor, nicotinic, alpha 9 / Q9UGM1* / cholinergic receptor nicotinic alpha 9 subunit* / cholinergic receptor, nicotinic, alpha polypeptide 9*ENSDARG0000005468025
chrne / cholinergic receptor, nicotinic, epsilon / P20782* / Q04844* / cholinergic receptor nicotinic epsilon subunit* / cholinergic receptor, nicotinic, epsilon polypeptide*ENSDARG0000003430724
chrna10a / cholinergic receptor, nicotinic, alpha 10aENSDARG0000001111324
LO018568.1 / CHRNA9* / Q9UGM1* / cholinergic receptor nicotinic alpha 9 subunit*ENSDARG0000009918124
si:ch211-39a7.1ENSDARG0000003742723
CR847523.1ENSDARG0000010811823
chrnd / cholinergic receptor, nicotinic, delta (muscle) / P02716* / Q07001* / cholinergic receptor nicotinic delta subunit* / cholinergic receptor, nicotinic, delta polypeptide*ENSDARG0000001934223
chrnb1 / cholinergic receptor, nicotinic, beta 1 (muscle) / P09690* / P11230* / cholinergic receptor nicotinic beta 1 subunit* / cholinergic receptor, nicotinic, beta polypeptide 1 (muscle)*ENSDARG0000006966021
chrnb1l / cholinergic receptor, nicotinic, beta 1 (muscle) like / CHRNB1* / P09690* / P11230* / cholinergic receptor nicotinic beta 1 subunit* / cholinergic receptor, nicotinic, beta polype...ENSDARG0000002253221
chrna7 / cholinergic receptor, nicotinic, alpha 7 (neuronal) / Q494W8* / P36544* / P49582* / CHRFAM7A* / cholinergic receptor nicotinic alpha 7 subunit* / CHRNA7 (exons 5-10) and FAM7A (exo...ENSDARG0000010170221
FO907089.1 / Q494W8* / CHRNA7* / P36544* / CHRFAM7A* / cholinergic receptor nicotinic alpha 7 subunit* / CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion*ENSDARG0000010152221
si:ch73-380n15.2ENSDARG0000008722421


Protein motifs (from Interpro)
Interpro ID Name
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0098655 cation transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA
 molecular_functionGO:0022850 serotonin-gated cation-selective channel activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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