ENSDARG00000096821


Danio rerio

Features
Gene ID: ENSDARG00000096821
  
Biological name :si:ch211-256e16.7
  
Synonyms : si:ch211-256e16.7
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 58092212
Gene end: 58097473
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000128416
swissprot - X1WDW6
ZFIN ID - ZDB-GENE-131127-298
Ensembl - ENSDARG00000096821
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000026015Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-256e16.4ENSDARG0000007842878
si:ch211-256e16.10ENSDARG0000009756668
si:ch211-256e16.6ENSDARG0000007960363
si:dkey-49c17.4ENSDARG0000007482433
HTR3C / 5-hydroxytryptamine receptor 3C / HTR3D* / HTR3E* / A5X5Y0* / Q8WXA8* / Q70Z44* / 5-hydroxytryptamine receptor 3D* / 5-hydroxytryptamine receptor 3E*ENSDARG0000007795932
FO818743.1ENSDARG0000010267532
htr3a / 5-hydroxytryptamine (serotonin) receptor 3A / P46098* / 5-hydroxytryptamine receptor 3A*ENSDARG0000008921232
htr3b / 5-hydroxytryptamine (serotonin) receptor 3B / O95264* / Q9JHJ5* / 5-hydroxytryptamine receptor 3B*ENSDARG0000006174926
chrne / cholinergic receptor, nicotinic, epsilon / P20782* / Q04844* / cholinergic receptor nicotinic epsilon subunit* / cholinergic receptor, nicotinic, epsilon polypeptide*ENSDARG0000003430724
chrng / cholinergic receptor, nicotinic, gamma / P07510* / cholinergic receptor nicotinic gamma subunit*ENSDARG0000008664723
LO018568.1 / CHRNA9* / Q9UGM1* / cholinergic receptor nicotinic alpha 9 subunit*ENSDARG0000009918123
chrna9 / cholinergic receptor, nicotinic, alpha 9 / Q9UGM1* / cholinergic receptor nicotinic alpha 9 subunit* / cholinergic receptor, nicotinic, alpha polypeptide 9*ENSDARG0000005468023
si:ch211-39a7.1ENSDARG0000003742723
si:ch73-380n15.2ENSDARG0000008722422
chrna10a / cholinergic receptor, nicotinic, alpha 10aENSDARG0000001111322
chrnd / cholinergic receptor, nicotinic, delta (muscle) / P02716* / Q07001* / cholinergic receptor nicotinic delta subunit* / cholinergic receptor, nicotinic, delta polypeptide*ENSDARG0000001934222
CR847523.1ENSDARG0000010811822
chrna7 / cholinergic receptor, nicotinic, alpha 7 (neuronal) / Q494W8* / P36544* / P49582* / CHRFAM7A* / cholinergic receptor nicotinic alpha 7 subunit* / CHRNA7 (exons 5-10) and FAM7A (exo...ENSDARG0000010170221
FO907089.1 / Q494W8* / CHRNA7* / P36544* / CHRFAM7A* / cholinergic receptor nicotinic alpha 7 subunit* / CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion*ENSDARG0000010152221
chrnb1l / cholinergic receptor, nicotinic, beta 1 (muscle) like / CHRNB1* / P09690* / P11230* / cholinergic receptor nicotinic beta 1 subunit* / cholinergic receptor, nicotinic, beta polype...ENSDARG0000002253219


Protein motifs (from Interpro)
Interpro ID Name
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0098655 cation transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0022850 serotonin-gated cation-selective channel activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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