ENSDARG00000011818


Danio rerio

Features
Gene ID: ENSDARG00000011818
  
Biological name :batf
  
Synonyms : basic leucine zipper transcription factor, ATF-like / batf / F1QW76
  
Possible biological names infered from orthology : basic leucine zipper ATF-like transcription factor / Basic leucine zipper transcriptional factor ATF-like / O35284 / Q16520
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 46572550
Gene end: 46646556
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000014497
Ensembl peptide - ENSDARP00000122640
Ensembl peptide - ENSDARP00000139650
NCBI entrez gene - 564589     See in Manteia.
RefSeq - NM_001045059
RefSeq Peptide - NP_001038524
swissprot - F1QW76
swissprot - Q5SP65
ZFIN ID - ZDB-GENE-041014-291
Ensembl - ENSDARG00000011818
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BATFENSGALG00000010323Gallus gallus
 BATFENSG00000156127Homo sapiens
 BatfENSMUSG00000034266Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
batf3 / basic leucine zipper transcription factor, ATF-like 3 / Q9D275* / Q9NR55* / basic leucine zipper ATF-like transcription factor 3* / Basic leucine zipper transcriptional factor ATF-like 3 *ENSDARG0000004257739
si:dkey-23i12.7 / BATF2* / Q8N1L9* / Q8R1H8* / basic leucine zipper ATF-like transcription factor 2* / Mus musculus basic leucine zipper transcription factor, ATF-like 2 (Batf2), transcript...ENSDARG0000010556231


Protein motifs (from Interpro)
Interpro ID Name
 IPR000837  AP-1 transcription factor
 IPR004827  Basic-leucine zipper domain
 IPR029820  Basic leucine zipper transcriptional factor ATF-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001816 cytokine production ISS
 biological_processGO:0002320 lymphoid progenitor cell differentiation ISS
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030330 DNA damage response, signal transduction by p53 class mediator ISS
 biological_processGO:0042832 defense response to protozoan ISS
 biological_processGO:0043011 myeloid dendritic cell differentiation ISS
 biological_processGO:0045064 T-helper 2 cell differentiation ISS
 biological_processGO:0045190 isotype switching ISS
 biological_processGO:0060218 hematopoietic stem cell differentiation ISS
 biological_processGO:0072539 T-helper 17 cell differentiation ISS
 biological_processGO:0072540 T-helper 17 cell lineage commitment ISS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr