ENSDARG00000042577


Danio rerio

Features
Gene ID: ENSDARG00000042577
  
Biological name :batf3
  
Synonyms : basic leucine zipper transcription factor, ATF-like 3 / batf3
  
Possible biological names infered from orthology : basic leucine zipper ATF-like transcription factor 3 / Basic leucine zipper transcriptional factor ATF-like 3 / Q9D275 / Q9NR55
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 37812699
Gene end: 37813863
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000121111
swissprot - F1R7I8
ZFIN ID - ZDB-GENE-041014-356
Ensembl - ENSDARG00000042577
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BATF3ENSGALG00000035516Gallus gallus
 BATF3ENSG00000123685Homo sapiens
 Batf3ENSMUSG00000026630Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
batf / F1QW76 / basic leucine zipper transcription factor, ATF-like / Q16520* / O35284* / basic leucine zipper ATF-like transcription factor* / Basic leucine zipper transcriptional factor ATF-like *ENSDARG0000001181840
si:dkey-23i12.7 / BATF2* / Q8N1L9* / Q8R1H8* / basic leucine zipper ATF-like transcription factor 2* / Mus musculus basic leucine zipper transcription factor, ATF-like 2 (Batf2), transcript...ENSDARG0000010556232


Protein motifs (from Interpro)
Interpro ID Name
 IPR000837  AP-1 transcription factor
 IPR004827  Basic-leucine zipper domain
 IPR029818  Basic leucine zipper transcriptional factor ATF-like 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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